Genomic imprinting effects on complex traits in domesticated animal species

AM O'Doherty, DE MacHugh, C Spillane… - Frontiers in …, 2015 - frontiersin.org
Monoallelically expressed genes that exert their phenotypic effect in a parent-of-origin
specific manner are considered to be subject to genomic imprinting, the most well …

Use of genomic tools to improve cattle health in the context of infectious diseases

MM Raszek, LL Guan, GS Plastow - Frontiers in genetics, 2016 - frontiersin.org
Although infectious diseases impose a heavy economic burden on the cattle industry, the
etiology of many disorders that affect livestock is not fully elucidated, and effective …

Genomic analysis of the domestication and post-Spanish conquest evolution of the llama and alpaca

R Fan, Z Gu, X Guang, JC Marín, V Varas, BA González… - Genome Biology, 2020 - Springer
Background Despite their regional economic importance and being increasingly reared
globally, the origins and evolution of the llama and alpaca remain poorly understood. Here …

Whole genome resequencing reveals genetic diversity and selection signatures of Ethiopian indigenous cattle adapted to local environments

E Terefe, G Belay, A Tijjani, J Han, O Hanotte - Diversity, 2023 - mdpi.com
Cattle are among the most important domesticated bovid species in the world, of which
Ethiopia possesses large populations adapted to different agro-ecologies and production …

Gestational diabetes mellitus alters DNA methylation profiles in pancreas of the offspring mice

Z Zhu, X Chen, Y Xiao, J Wen, J Chen, K Wang… - Journal of Diabetes and …, 2019 - Elsevier
Gestational diabetes mellitus (GDM), which has an increasing global prevalence,
contributes to the susceptibility to metabolic dysregulation and obesity in the offspring via …

Genome scan for parent-of-origin QTL effects on bovine growth and carcass traits

IG Imumorin, EH Kim, YM Lee, DJ De Koning… - Frontiers in …, 2011 - frontiersin.org
Parent-of-origin effects (POE) such as genomic imprinting influence growth and body
composition in livestock, rodents, and humans. Here, we report the results of a genome scan …

Analysis of alternative splicing events by RNA sequencing in the ovaries of Xiang pig at estrous and diestrous

LT Tang, XQ Ran, N Mao, FP Zhang, X Niu, YQ Ruan… - Theriogenology, 2018 - Elsevier
Alternative splicing (AS) is an important mechanism for controlling gene expression, which
regulates multiple biological processes in higher organisms. Chinese indigenous Xiang pig …

Prenatal transportation stress alters genome-wide DNA methylation in suckling Brahman bull calves,

BP Littlejohn, DM Price, DA Neuendorff… - Journal of Animal …, 2018 - academic.oup.com
The objective of this experiment was to identify genome-wide differential methylation of DNA
in young prenatally stressed (PNS) bull calves. Mature Brahman cows (n= 48) were …

Accurate prediction of protein-lncRNA interactions by diffusion and HeteSim features across heterogeneous network

L Deng, J Wang, Y Xiao, Z Wang, H Liu - BMC bioinformatics, 2018 - Springer
Background Identifying the interactions between proteins and long non-coding RNAs
(lncRNAs) is of great importance to decipher the functional mechanisms of lncRNAs …

Imprinted loci in domestic livestock species as epigenomic targets for artificial selection of complex traits

DA Magee, C Spillane, EW Berkowicz… - Animal …, 2014 - Wiley Online Library
The phenomenon of genomic imprinting, whereby a subset of mammalian genes display
parent‐of‐origin‐specific monoallelic expression, is one of the most active areas of …