The structural, functional and evolutionary impact of transposable elements in eukaryotes

D Almojil, Y Bourgeois, M Falis, I Hariyani, J Wilcox… - Genes, 2021 - mdpi.com
Transposable elements (TEs) are nearly ubiquitous in eukaryotes. The increase in genomic
data, as well as progress in genome annotation and molecular biology techniques, have …

Transposable elements and stress in vertebrates: An overview

AM Pappalardo, V Ferrito, MA Biscotti… - International Journal of …, 2021 - mdpi.com
Since their identification as genomic regulatory elements, Transposable Elements (TEs)
were considered, at first, molecular parasites and later as an important source of genetic …

Insights into mammalian TE diversity through the curation of 248 genome assemblies

AB Osmanski, NS Paulat, J Korstian, JR Grimshaw… - Science, 2023 - science.org
We examined transposable element (TE) content of 248 placental mammal genome
assemblies, the largest de novo TE curation effort in eukaryotes to date. We found that …

Genome assembly of the foot-flagging frog, Staurois parvus: a resource for understanding mechanisms of behavior

MA Holtz, R Racicot, D Preininger… - G3: Genes …, 2023 - academic.oup.com
Elaborate and skilled movements of the body have been selected in a variety of species as
courtship and rivalry signals. One roadblock in studying these behaviors has been a lack of …

Genome-Wide Survey and Development of the First Microsatellite Markers Database (AnCorDB) in Anemone coronaria L.

M Martina, A Acquadro, L Barchi, D Gulino… - International Journal of …, 2022 - mdpi.com
Anemone coronaria L.(2n= 2x= 16) is a perennial, allogamous, highly heterozygous plant
marketed as a cut flower or in gardens. Due to its large genome size, limited efforts have …

Comparative analysis of amphibian genomes: An emerging resource for basic and applied research

TA Kosch, AJ Crawford… - Molecular ecology …, 2025 - Wiley Online Library
Amphibians are the most threatened group of vertebrates and are in dire need of
conservation intervention to ensure their continued survival. They exhibit unique features …

Transposable element and host silencing activity in gigantic genomes

J Wang, L Yuan, J Tang, J Liu, C Sun… - Frontiers in Cell and …, 2023 - frontiersin.org
Transposable elements (TEs) and the silencing machinery of their hosts are engaged in a
germline arms-race dynamic that shapes TE accumulation and, therefore, genome size. In …

Comparative genomics reveals insights into anuran genome size evolution

B Zuo, LM Nneji, YB Sun - BMC genomics, 2023 - Springer
Background Amphibians, particularly anurans, display an enormous variation in genome
size. Due to the unavailability of whole genome datasets in the past, the genomic elements …

Convergent degenerated regulatory elements associated with limb loss in limbless amphibians and reptiles

C Zhu, S Li, D Zhang, J Zhang, G Wang… - Molecular Biology …, 2024 - academic.oup.com
Limbs are a defining characteristic of tetrapods, yet numerous taxa, primarily among
amphibians and reptiles, have independently lost limbs as an adaptation to new ecological …

Multi-omics analysis reveals the evolution, function, and regulatory mechanisms of SPF pheromones in Anurans

P Zheng, Y Lv, Y Gong, G Wang, B Wang, X Lin… - Communications …, 2024 - nature.com
Pheromones play a pivotal role in chemical communication across various taxa, with protein-
based pheromones being particularly significant in amphibian courtship and reproduction. In …