The structural, functional and evolutionary impact of transposable elements in eukaryotes
Transposable elements (TEs) are nearly ubiquitous in eukaryotes. The increase in genomic
data, as well as progress in genome annotation and molecular biology techniques, have …
data, as well as progress in genome annotation and molecular biology techniques, have …
Transposable elements and stress in vertebrates: An overview
AM Pappalardo, V Ferrito, MA Biscotti… - International Journal of …, 2021 - mdpi.com
Since their identification as genomic regulatory elements, Transposable Elements (TEs)
were considered, at first, molecular parasites and later as an important source of genetic …
were considered, at first, molecular parasites and later as an important source of genetic …
Insights into mammalian TE diversity through the curation of 248 genome assemblies
We examined transposable element (TE) content of 248 placental mammal genome
assemblies, the largest de novo TE curation effort in eukaryotes to date. We found that …
assemblies, the largest de novo TE curation effort in eukaryotes to date. We found that …
Genome assembly of the foot-flagging frog, Staurois parvus: a resource for understanding mechanisms of behavior
MA Holtz, R Racicot, D Preininger… - G3: Genes …, 2023 - academic.oup.com
Elaborate and skilled movements of the body have been selected in a variety of species as
courtship and rivalry signals. One roadblock in studying these behaviors has been a lack of …
courtship and rivalry signals. One roadblock in studying these behaviors has been a lack of …
Genome-Wide Survey and Development of the First Microsatellite Markers Database (AnCorDB) in Anemone coronaria L.
Anemone coronaria L.(2n= 2x= 16) is a perennial, allogamous, highly heterozygous plant
marketed as a cut flower or in gardens. Due to its large genome size, limited efforts have …
marketed as a cut flower or in gardens. Due to its large genome size, limited efforts have …
Comparative analysis of amphibian genomes: An emerging resource for basic and applied research
TA Kosch, AJ Crawford… - Molecular ecology …, 2025 - Wiley Online Library
Amphibians are the most threatened group of vertebrates and are in dire need of
conservation intervention to ensure their continued survival. They exhibit unique features …
conservation intervention to ensure their continued survival. They exhibit unique features …
Transposable element and host silencing activity in gigantic genomes
J Wang, L Yuan, J Tang, J Liu, C Sun… - Frontiers in Cell and …, 2023 - frontiersin.org
Transposable elements (TEs) and the silencing machinery of their hosts are engaged in a
germline arms-race dynamic that shapes TE accumulation and, therefore, genome size. In …
germline arms-race dynamic that shapes TE accumulation and, therefore, genome size. In …
Comparative genomics reveals insights into anuran genome size evolution
B Zuo, LM Nneji, YB Sun - BMC genomics, 2023 - Springer
Background Amphibians, particularly anurans, display an enormous variation in genome
size. Due to the unavailability of whole genome datasets in the past, the genomic elements …
size. Due to the unavailability of whole genome datasets in the past, the genomic elements …
Convergent degenerated regulatory elements associated with limb loss in limbless amphibians and reptiles
C Zhu, S Li, D Zhang, J Zhang, G Wang… - Molecular Biology …, 2024 - academic.oup.com
Limbs are a defining characteristic of tetrapods, yet numerous taxa, primarily among
amphibians and reptiles, have independently lost limbs as an adaptation to new ecological …
amphibians and reptiles, have independently lost limbs as an adaptation to new ecological …
Multi-omics analysis reveals the evolution, function, and regulatory mechanisms of SPF pheromones in Anurans
P Zheng, Y Lv, Y Gong, G Wang, B Wang, X Lin… - Communications …, 2024 - nature.com
Pheromones play a pivotal role in chemical communication across various taxa, with protein-
based pheromones being particularly significant in amphibian courtship and reproduction. In …
based pheromones being particularly significant in amphibian courtship and reproduction. In …