Acute-on-chronic liver failure clinical guidelines

JS Bajaj, JG O'Leary, JC Lai, F Wong… - Official journal of the …, 2022 - journals.lww.com
In patients with cirrhosis and chronic liver disease, acute-on-chronic liver failure is emerging
as a major cause of mortality. These guidelines indicate the preferred approach to the …

Methicillin-resistant Staphylococcus aureus

AS Lee, H De Lencastre, J Garau… - Nature reviews Disease …, 2018 - nature.com
Since the 1960s, methicillin-resistant Staphylococcus aureus (MRSA) has emerged,
disseminated globally and become a leading cause of bacterial infections in both health …

Overview of next‐generation sequencing technologies

BE Slatko, AF Gardner… - Current protocols in …, 2018 - Wiley Online Library
High throughput DNA sequencing methodology (next generation sequencing; NGS) has
rapidly evolved over the past 15 years and new methods are continually being …

The Oxford Nanopore MinION: delivery of nanopore sequencing to the genomics community

M Jain, HE Olsen, B Paten, M Akeson - Genome biology, 2016 - Springer
Nanopore DNA strand sequencing has emerged as a competitive, portable technology.
Reads exceeding 150 kilobases have been achieved, as have in-field detection and …

Oxford Nanopore MinION sequencing and genome assembly

H Lu, F Giordano, Z Ning - Genomics, Proteomics and …, 2016 - academic.oup.com
The revolution of genome sequencing is continuing after the successful second-generation
sequencing (SGS) technology. The third-generation sequencing (TGS) technology, led by …

Genome-based prediction of bacterial antibiotic resistance

M Su, SW Satola, TD Read - Journal of clinical microbiology, 2019 - Am Soc Microbiol
Clinical microbiology has long relied on growing bacteria in culture to determine
antimicrobial susceptibility profiles, but the use of whole-genome sequencing for antibiotic …

The evolving challenge of infections in cirrhosis

JS Bajaj, PS Kamath, KR Reddy - New England Journal of …, 2021 - Mass Medical Soc
Infections in Patients with Cirrhosis Patients with cirrhosis are at increased risk for serious
infections, including spontaneous bacterial peritonitis, multidrug-resistant infection, and …

Next-generation sequencing diagnostics of bacteremia in septic patients

S Grumaz, P Stevens, C Grumaz, SO Decker… - Genome medicine, 2016 - Springer
Background Bloodstream infections remain one of the major challenges in intensive care
units, leading to sepsis or even septic shock in many cases. Due to the lack of timely …

Fast and sensitive mapping of nanopore sequencing reads with GraphMap

I Sović, M Šikić, A Wilm, SN Fenlon, S Chen… - Nature …, 2016 - nature.com
Realizing the democratic promise of nanopore sequencing requires the development of new
bioinformatics approaches to deal with its specific error characteristics. Here we present …

EMA and EFSA Joint Scientific Opinion on measures to reduce the need to use antimicrobial agents in animal husbandry in the European Union, and the resulting …

EMA Committee for Medicinal Products for … - EFSA …, 2017 - Wiley Online Library
EFSA and EMA have jointly reviewed measures taken in the EU to reduce the need for and
use of antimicrobials in food‐producing animals, and the resultant impacts on antimicrobial …