Enhancing diversity analysis by repeatedly rarefying next generation sequencing data describing microbial communities

ES Cameron, PJ Schmidt, BJM Tremblay, MB Emelko… - Scientific reports, 2021 - nature.com
Amplicon sequencing has revolutionized our ability to study DNA collected from
environmental samples by providing a rapid and sensitive technique for microbial …

Culturing the uncultured microbial majority in activated sludge: a critical review

Y Zhang, T Zhang - Critical Reviews in Environmental Science and …, 2023 - Taylor & Francis
Activated sludge is a widely applied wastewater treatment process that mainly uses
suspended microbial flocs to remove pollutants in wastewater. With the characteristics of …

Microbial co-occurrence network topological properties link with reactor parameters and reveal importance of low-abundance genera

B Guo, L Zhang, H Sun, M Gao, N Yu… - npj Biofilms and …, 2022 - nature.com
Operational factors and microbial interactions affect the ecology in anaerobic digestion
systems. From 12 lab-scale reactors operated under distinct engineering conditions …

Ultra-accurate microbial amplicon sequencing with synthetic long reads

BJ Callahan, D Grinevich, S Thakur, MA Balamotis… - Microbiome, 2021 - Springer
Background Out of the many pathogenic bacterial species that are known, only a fraction are
readily identifiable directly from a complex microbial community using standard next …

High speciation rate of niche specialists in hot springs

Q He, S Wang, K Feng, ST Michaletz, W Hou… - The ISME …, 2023 - academic.oup.com
Ecological and evolutionary processes simultaneously regulate microbial diversity, but the
evolutionary processes and their driving forces remain largely unexplored. Here we …

[HTML][HTML] Characterizing the growing microorganisms at species level in 46 anaerobic digesters at Danish wastewater treatment plants: A six-year survey on microbial …

C Jiang, M Peces, MH Andersen, S Kucheryavskiy… - Water research, 2021 - Elsevier
Anaerobic digestion (AD) is a key technology at many wastewater treatment plants (WWTPs)
for converting primary and surplus activated sludge to methane-rich biogas. However, the …

Depth-dependent patterns of soil microbial community in the E-waste dismantling area

K Yan, Q You, S Wang, Y Zou, J Chen, J Xu… - Journal of Hazardous …, 2023 - Elsevier
The long-term dismantling of electronic waste (E-waste) has contaminated the soil
environment considerably. In spite of this, it is unknown if it affects the depth-resolved …

Functional and molecular approaches for studying and controlling microbial communities in anaerobic digestion of organic waste: a review

N Dinova, W Peng, M Kirilova-Belouhova, C Li… - … Science and Bio …, 2023 - Springer
Anaerobic digestion (AD) has been studied for centuries, but its operation still mainly relies
on physicochemical indicators. Recent advanced molecular biological tools can unveil the …

Synthesis of an autochthonous microbial community by analyzing the core microorganisms responsible for the critical flavor of bran vinegar

L Li, N Li, J Fu, J Liu, XP Wen, H Cao, H Xu… - Food Research …, 2024 - Elsevier
Traditional bran vinegar brewing unfolds through natural fermentation, a process driven by
spontaneous microbial activity. The unique metabolic activities of various microorganisms …

Hybrid granule-floc sludge distribution and its potential for upgrading a tropical continuous-flow wastewater treatment plant

L Shi, R Li, Y Bu, Y Wei, W Cai, Z Huang… - Journal of Water Process …, 2023 - Elsevier
Hybrid granule-floc sludge, previously overlooked, is now recognized for its efficient
pollutant removal and reduced land footprint, offering potential for upgrading wastewater …