QMEANDisCo—distance constraints applied on model quality estimation
G Studer, C Rempfer, AM Waterhouse… - …, 2020 - academic.oup.com
Motivation Methods that estimate the quality of a 3D protein structure model in absence of an
experimental reference structure are crucial to determine a model's utility and potential …
experimental reference structure are crucial to determine a model's utility and potential …
VARIDT 2.0: structural variability of drug transporter
The structural variability data of drug transporter (DT) are key for research on precision
medicine and rational drug use. However, these valuable data are not sufficiently covered …
medicine and rational drug use. However, these valuable data are not sufficiently covered …
Structure and dynamics of membrane protein in SARS-CoV-2
Abstract SARS-CoV-2 membrane (M) protein performs a variety of critical functions in virus
infection cycle. However, the expression and purification of membrane protein structure is …
infection cycle. However, the expression and purification of membrane protein structure is …
Estimation of model accuracy in CASP13
J Cheng, MH Choe, A Elofsson, KS Han… - Proteins: Structure …, 2019 - Wiley Online Library
Methods to reliably estimate the accuracy of 3D models of proteins are both a fundamental
part of most protein folding pipelines and important for reliable identification of the best …
part of most protein folding pipelines and important for reliable identification of the best …
Pathogenomic analyses of Shigella isolates inform factors limiting shigellosis prevention and control across LMICs
RJ Bengtsson, AJ Simpkin, CV Pulford, R Low… - Nature …, 2022 - nature.com
Shigella spp. are the leading bacterial cause of severe childhood diarrhoea in low-and
middle-income countries (LMICs), are increasingly antimicrobial resistant and have no …
middle-income countries (LMICs), are increasingly antimicrobial resistant and have no …
The structure assessment web server: for proteins, complexes and more
The 'structure assessment'web server is a one-stop shop for interactive evaluation and
benchmarking of structural models of macromolecular complexes including proteins and …
benchmarking of structural models of macromolecular complexes including proteins and …
Cryo-EM structure of the fully assembled Elongator complex
M Jaciuk, D Scherf, K Kaszuba, M Gaik… - Nucleic Acids …, 2023 - academic.oup.com
Transfer RNA (tRNA) molecules are essential to decode messenger RNA codons during
protein synthesis. All known tRNAs are heavily modified at multiple positions through post …
protein synthesis. All known tRNAs are heavily modified at multiple positions through post …
Curcumin to inhibit binding of spike glycoprotein to ACE2 receptors: Computational modelling, simulations, and ADMET studies to explore curcuminoids against novel …
D Shanmugarajan, P Prabitha, BRP Kumar, B Suresh - RSC advances, 2020 - pubs.rsc.org
The recent emergence of the novel coronavirus (SARS-CoV-2) has raised global concern as
it is declared a pandemic by the WHO. However, to date, there is no current regimen to …
it is declared a pandemic by the WHO. However, to date, there is no current regimen to …
Disease-associated missense mutations in GluN2B subunit alter NMDA receptor ligand binding and ion channel properties
Genetic and bioinformatic analyses have identified missense mutations in GRIN2B encoding
the NMDA receptor GluN2B subunit in autism, intellectual disability, Lennox Gastaut and …
the NMDA receptor GluN2B subunit in autism, intellectual disability, Lennox Gastaut and …
Current progress on equilibrative nucleoside transporter function and inhibitor design
S Rehan, S Shahid, TA Salminen… - … Life Sciences R&D, 2019 - journals.sagepub.com
Physiological nucleosides are used for the synthesis of DNA, RNA, and ATP in the cell and
serve as universal mammalian signaling molecules that regulate physiological processes …
serve as universal mammalian signaling molecules that regulate physiological processes …