PATRIC, the bacterial bioinformatics database and analysis resource

AR Wattam, D Abraham, O Dalay, TL Disz… - Nucleic acids …, 2014 - academic.oup.com
Abstract The Pathosystems Resource Integration Center (PATRIC) is the all-bacterial
Bioinformatics Resource Center (BRC)(http://www. patricbrc. org). A joint effort by two of the …

Engineered SAM synthetases for enzymatic generation of AdoMet analogs with photocaging groups and reversible DNA modification in cascade reactions

F Michailidou, N Klöcker… - Angewandte Chemie …, 2021 - Wiley Online Library
Methylation and demethylation of DNA, RNA and proteins has emerged as a major
regulatory mechanism. Studying the function of these modifications would benefit from tools …

[HTML][HTML] Target-based vs. phenotypic screenings in Leishmania drug discovery: A marriage of convenience or a dialogue of the deaf?

RM Reguera, E Calvo-Álvarez, R Álvarez-Velilla… - International Journal for …, 2014 - Elsevier
Drug discovery programs sponsored by public or private initiatives pursue the same
ambitious goal: a crushing defeat of major Neglected Tropical Diseases (NTDs) during this …

Enolase inhibitors as therapeutic leads for Naegleria fowleri infection

JE Milanes, VC Yan, CD Pham, F Muller… - PLoS …, 2024 - journals.plos.org
Infections with the pathogenic free-living amoebae Naegleria fowleri can lead to life-
threatening illnesses including catastrophic primary amoebic meningoencephalitis (PAM) …

Increasing the structural coverage of tuberculosis drug targets

L Baugh, I Phan, DW Begley, MC Clifton, B Armour… - Tuberculosis, 2015 - Elsevier
High-resolution three-dimensional structures of essential Mycobacterium tuberculosis (Mtb)
proteins provide templates for TB drug design, but are available for only a small fraction of …

Identification of potent and selective N-myristoyltransferase inhibitors of Plasmodium vivax liver stage hypnozoites and schizonts

D Rodríguez-Hernández, K Vijayan, R Zigweid… - Nature …, 2023 - nature.com
Drugs targeting multiple stages of the Plasmodium vivax life cycle are needed to reduce the
health and economic burdens caused by malaria worldwide. N-myristoyltransferase (NMT) …

Recent contributions of structure-based drug design to the development of antibacterial compounds

BL Staker, GW Buchko, PJ Myler - Current opinion in microbiology, 2015 - Elsevier
Highlights•New beta-lactamase inhibitor with novel mechanism of action is
reviewed.•Methods of targeting bacterial gyrase compounds are discussed.•Structures of …

Identification of and Structural Insights into Hit Compounds Targeting N-Myristoyltransferase for Cryptosporidium Drug Development

MK Fenwick, AR Reers, Y Liu, R Zigweid… - ACS Infectious …, 2023 - ACS Publications
Each year, approximately 50,000 children under 5 die as a result of diarrhea caused by
Cryptosporidium parvum, a protozoan parasite. There are currently no effective drugs or …

Duplex microfluidic SERS detection of pathogen antigens with nanoyeast single-chain variable fragments

Y Wang, S Rauf, YS Grewal, LJ Spadafora… - Analytical …, 2014 - ACS Publications
Quantitative and accurate detection of multiple biomarkers would allow for the rapid
diagnosis and treatment of diseases induced by pathogens. Monoclonal antibodies are …

Structural Dynamics of Native-Like Ions in the Gas Phase: Results from Tandem Ion Mobility of Cytochrome c

SJ Allen, RM Eaton, MF Bush - Analytical chemistry, 2017 - ACS Publications
Ion mobility (IM) is a gas-phase separation technique that is used to determine the collision
cross sections of native-like ions of proteins and protein complexes, which are in turn used …