New insights into the phylogenetic relationships among wild onions (Allium, Amaryllidaceae), with special emphasis on the subgenera Anguinum and Rhizirideum …

JY Yang, SH Kim, HY Gil, HJ Choi… - Frontiers in Plant Science, 2023 - frontiersin.org
The genus Allium, with over 900 species, is one of the largest monocotyledonous genera
and is widely accepted with 15 recognized subgenera and 72 sections. The robust …

Structural diversities and phylogenetic signals in plastomes of the early-divergent angiosperms: a case study in Saxifragales

S Han, H Ding, D Bi, S Zhang, R Yi, J Gao, J Yang… - Plants, 2022 - mdpi.com
As representative of the early-divergent groups of angiosperms, Saxifragales is extremely
divergent in morphology, comprising 15 families. Within this order, our previous case studies …

A large intergenic spacer leads to the increase in genome size and sequential gene movement around IR/SC boundaries in the chloroplast genome of Adiantum …

X Gu, M Zhu, Y Su, T Wang - International Journal of Molecular Sciences, 2022 - mdpi.com
Expansion and contraction (ebb and flow events) of inverted repeat (IR) boundaries occur
and are generally considered to be major factors affecting chloroplast (cp) genome size …

Insights into taxonomy and phylogenetic relationships of eleven Aristolochia species based on chloroplast genome

X Bai, G Wang, Y Ren, Y Su, J Han - Frontiers in Plant Science, 2023 - frontiersin.org
Introduction The Aristolochia, as an important genus comprised of over 400 species, has
attracted much interest because of its unique chemical and pharmacological properties …

Phylogenomics and plastomics offer new evolutionary perspectives on Kalanchoideae (Crassulaceae)

S Han, S Zhang, R Yi, D Bi, H Ding, J Yang… - Annals of …, 2024 - academic.oup.com
Abstract Background and Aims Kalanchoideae is one of three subfamilies within
Crassulaceae and contains four genera. Despite previous efforts, the phylogeny of …

Ten Plastomes of Crassula (Crassulaceae) and Phylogenetic Implications

H Ding, S Han, Y Ye, D Bi, S Zhang, R Yi, J Gao… - Biology, 2022 - mdpi.com
Simple Summary Plastids are semi-autonomous plant organelles which play critical roles in
photosynthesis, stress response, and storage. The plastid genomes (plastomes) in …

Comparative analysis of the complete chloroplast genomes of six threatened subgenus Gynopodium (Magnolia) species

H Xie, L Zhang, C Zhang, H Chang, Z Xi, X Xu - BMC genomics, 2022 - Springer
Abstract Background The subgenus Gynopodium belonging to genus Magnolia have high
ornamental, economic, and ecological value. Subgenus Gynopodium contains eight …

Plastomic data shed new light on the phylogeny, biogeography, and character evolution of the family Crassulaceae

XY Liu, DQ Zhang, JQ Zhang - Journal of Systematics and …, 2023 - Wiley Online Library
Crassulaceae is a mid‐sized family of angiosperms, most species of which are herbaceous
succulents, usually with 5‐merous flowers and one or two whorls of stamens. Although …

Comparative plastomes of Pueraria montana var. lobata (Leguminosae: Phaseoleae) and closely related taxa: insights into phylogenomic implications and …

Y Zhou, XH Shang, L Xiao, ZD Wu, S Cao, HB Yan - BMC genomics, 2023 - Springer
Background Pueraria montana var. lobata (kudzu) is an important food and medicinal crop
in Asia. However, the phylogenetic relationships between Pueraria montana var. lobata and …

Comparative chloroplast genomes: insights into the identification and phylogeny of rapid radiation genus Rhodiola

J Liu, E Zang, Y Tian, L Zhang, Y Li, L Shi… - Frontiers in Plant …, 2024 - frontiersin.org
Rhodiola L. is a genus exhibiting rapid radiation and represents a typical case for studying
plastid gene adaptation in species that spread from high altitudes to low altitudes. In this …