Protein dynamics and function from solution state NMR spectroscopy
M Kovermann, P Rogne, M Wolf-Watz - Quarterly reviews of …, 2016 - cambridge.org
It is well-established that dynamics are central to protein function; their importance is
implicitly acknowledged in the principles of the Monod, Wyman and Changeux model of …
implicitly acknowledged in the principles of the Monod, Wyman and Changeux model of …
Quantitative analysis of protein–ligand interactions by NMR
Protein–ligand interactions have been commonly studied through static structures of the
protein–ligand complex. Recently, however, there has been increasing interest in …
protein–ligand complex. Recently, however, there has been increasing interest in …
[HTML][HTML] Ubc13: the Lys63 ubiquitin chain building machine
Ubc13 is an ubiquitin E2 conjugating enzyme that participates with many different E3 ligases
to form lysine 63-linked (Lys63) ubiquitin chains that are critical to signaling in inflammatory …
to form lysine 63-linked (Lys63) ubiquitin chains that are critical to signaling in inflammatory …
[HTML][HTML] Mutations of Rad6 E2 ubiquitin-conjugating enzymes at alanine-126 in helix-3 affect ubiquitination activity and decrease enzyme stability
PK Shukla, D Sinha, AM Leng, JE Bissell… - Journal of Biological …, 2022 - ASBMB
Rad6, an E2 ubiquitin-conjugating enzyme conserved from yeast to humans, functions in
transcription, genome maintenance, and proteostasis. The contributions of many conserved …
transcription, genome maintenance, and proteostasis. The contributions of many conserved …
Covalent inhibition of Ubc13 affects ubiquitin signaling and reveals active site elements important for targeting
Ubc13 is an E2 ubiquitin conjugating enzyme that functions in nuclear DNA damage
signaling and cytoplasmic NF-κB signaling. Here, we present the structures of complexes of …
signaling and cytoplasmic NF-κB signaling. Here, we present the structures of complexes of …
[HTML][HTML] E2 superfamily of ubiquitin-conjugating enzymes: constitutively active or activated through phosphorylation in the catalytic cleft
Protein phosphorylation is a modification that offers a dynamic and reversible mechanism to
regulate the majority of cellular processes. Numerous diseases are associated with aberrant …
regulate the majority of cellular processes. Numerous diseases are associated with aberrant …
Molecular basis for K63-linked ubiquitination processes in double-strand DNA break repair: A focus on kinetics and dynamics
Cells are exposed to thousands of DNA damage events on a daily basis. This damage must
be repaired to preserve genetic information and prevent development of disease. The most …
be repaired to preserve genetic information and prevent development of disease. The most …
[HTML][HTML] RYBP is a K63-ubiquitin-chain-binding protein that inhibits homologous recombination repair
Summary Ring1-YY1-binding protein (RYBP) is a member of the non-canonical polycomb
repressive complex 1 (PRC1), and like other PRC1 members, it is best described as a …
repressive complex 1 (PRC1), and like other PRC1 members, it is best described as a …
Increased precision for analysis of protein–ligand dissociation constants determined from chemical shift titrations
CJ Markin, L Spyracopoulos - Journal of biomolecular NMR, 2012 - Springer
NMR is ideally suited for the analysis of protein–protein and protein ligand interactions with
dissociation constants ranging from~ 2 μM to~ 1 mM, and with kinetics in the fast exchange …
dissociation constants ranging from~ 2 μM to~ 1 mM, and with kinetics in the fast exchange …
Ubiquitin phosphorylated at Ser57 hyper-activates parkin
S George, SM Wang, Y Bi, M Treidlinger… - … et Biophysica Acta (BBA …, 2017 - Elsevier
Malfunction of the ubiquitin (Ub) E3 ligase, parkin, leads to defects in mitophagy and protein
quality control linked to Parkinson's disease. Parkin activity is stimulated by phosphorylation …
quality control linked to Parkinson's disease. Parkin activity is stimulated by phosphorylation …