Eukaryotic mismatch repair in relation to DNA replication

TA Kunkel, DA Erie - Annual review of genetics, 2015 - annualreviews.org
Three processes act in series to accurately replicate the eukaryotic nuclear genome. The
major replicative DNA polymerases strongly prevent mismatch formation, occasional …

Genome maintenance mechanisms for preventing cancer

JHJ Hoeijmakers - nature, 2001 - nature.com
The early notion that cancer is caused by mutations in genes critical for the control of cell
growth implied that genome stability is important for preventing oncogenesis. During the …

AlphaFill: enriching AlphaFold models with ligands and cofactors

ML Hekkelman, I de Vries, RP Joosten, A Perrakis - Nature Methods, 2023 - nature.com
Artificial intelligence-based protein structure prediction approaches have had a
transformative effect on biomolecular sciences. The predicted protein models in the …

A hold-and-feed mechanism drives directional DNA loop extrusion by condensin

IA Shaltiel, S Datta, L Lecomte, M Hassler… - Science, 2022 - science.org
Structural maintenance of chromosomes (SMC) protein complexes structure genomes by
extruding DNA loops, but the molecular mechanism that underlies their activity has …

Structural basis of detection and signaling of DNA single-strand breaks by human PARP-1

S Eustermann, WF Wu, MF Langelier, JC Yang… - Molecular cell, 2015 - cell.com
Summary Poly (ADP-ribose) polymerase 1 (PARP-1) is a key eukaryotic stress sensor that
responds in seconds to DNA single-strand breaks (SSBs), the most frequent genomic …

Mechanisms and functions of DNA mismatch repair

GM Li - Cell research, 2008 - nature.com
DNA mismatch repair (MMR) is a highly conserved biological pathway that plays a key role
in maintaining genomic stability. The specificity of MMR is primarily for base-base …

Mismatch repair

R Fishel, JB Lee - … , and Repair: Molecular Mechanisms and Pathology, 2016 - Springer
The concept of mismatch repair (MMR) was formulated independently in 1964 to explain the
removal of brominated nucleotides from DNA as well as gene conversion during genetic …

Electrochemistry of nonconjugated proteins and glycoproteins. Toward sensors for biomedicine and glycomics

E Paleček, J Tkáč, M Bartosik, T Bertók… - Chemical …, 2015 - ACS Publications
The present advances in biology are related to progress in genomics, proteomics, and other
“-omics”, including glycomics, working with a large amount of data regarding human and …

The multifaceted mismatch-repair system

J Jiricny - Nature reviews Molecular cell biology, 2006 - nature.com
By removing biosynthetic errors from newly synthesized DNA, mismatch repair (MMR)
improves the fidelity of DNA replication by several orders of magnitude. Loss of MMR brings …

DNA mismatch repair

TA Kunkel, DA Erie - Annu. Rev. Biochem., 2005 - annualreviews.org
▪ Abstract DNA mismatch repair (MMR) is an evolutionarily conserved process that corrects
mismatches generated during DNA replication and escape proofreading. MMR proteins also …