The construction of models of system behavior is of great importance throughout science
and engineering. In bioengineering and bionanotechnology, these often take the form of …

The mathematical formalism of mass-action chemical reaction networks (CRNs) has been
proposed as a mid-level programming language for dynamic molecular systems. Several …

We study chemical reaction networks (CRNs) as a kernel language for concurrency models
with semantics based on ordinary differential equations. We investigate the problem of …

As an engineering material, DNA is well suited for the construction of biochemical circuits
and systems, because it is simple enough that its interactions can be rationally designed …

Efforts in programming DNA and other biological molecules have recently focused on
general schemes to physically implement arbitrary Chemical Reaction Networks. Errors in …

With a view towards artificial cells, molecular communication systems, molecular multiagent
systems and federated learning, we propose a novel reaction network scheme (termed the …

The emerging fields of genetic engineering, synthetic biology, DNA computing, DNA
nanotechnology, and molecular programming herald the birth of a new information …

In recent years the use of non-traditional computing mechanisms has grown rapidly. One
paradigm uses chemical reaction networks (CRNs) to compute via chemical interactions …

Discovering relations between chemical reaction networks (CRNs) is a relevant problem in
computational systems biology for model reduction, to explain if a given system can be seen …

In isolation, chemical reaction networks and tile-based self-assembly are well-studied
models of chemical computation. Previously, we introduced the chemical reaction network …