Utility of B-factors in protein science: interpreting rigidity, flexibility, and internal motion and engineering thermostability
Z Sun, Q Liu, G Qu, Y Feng, MT Reetz - Chemical reviews, 2019 - ACS Publications
The term B-factor, sometimes called the Debye–Waller factor, temperature factor, or atomic
displacement parameter, is used in protein crystallography to describe the attenuation of X …
displacement parameter, is used in protein crystallography to describe the attenuation of X …
Consensus Finder web tool to predict stabilizing substitutions in proteins
The consensus sequence approach to predicting stabilizing substitutions in proteins rests on
the notion that conserved amino acids are more likely to contribute to the stability of a protein …
the notion that conserved amino acids are more likely to contribute to the stability of a protein …
Engineering and evaluation of thermostable IsPETase variants for PET degradation
S Brott, L Pfaff, J Schuricht, JN Schwarz… - Engineering in life …, 2022 - Wiley Online Library
Polyethylene terephthalate (PET) is a mass‐produced petroleum‐based synthetic polymer.
Enzymatic PET degradation using, for example, Ideonella sakaiensis PETase (IsPETase) …
Enzymatic PET degradation using, for example, Ideonella sakaiensis PETase (IsPETase) …
Improving the thermostability and activity of Paenibacillus pasadenensis chitinase through semi-rational design
P Xu, ZF Ni, MH Zong, XY Ou, JG Yang… - International journal of …, 2020 - Elsevier
Chitinase is a promising biocatalyst for chitin biotransformation in the field of recalcitrant
biomass degradation. Excellent catalytic performance is conducive to its commercial …
biomass degradation. Excellent catalytic performance is conducive to its commercial …
Assessment of the PETase conformational changes induced by poly (ethylene terephthalate) binding
CHS da Costa, AM Dos Santos… - Proteins: Structure …, 2021 - Wiley Online Library
Recently, a bacterium strain of Ideonella sakaiensis was identified with the uncommon
ability to degrade the poly (ethylene terephthalate)(PET). The PETase from I. sakaiensis …
ability to degrade the poly (ethylene terephthalate)(PET). The PETase from I. sakaiensis …
Leveraging intrinsic flexibility to engineer enhanced enzyme catalytic activity
CS Karamitros, K Murray… - Proceedings of the …, 2022 - National Acad Sciences
Dynamic motions of enzymes occurring on a broad range of timescales play a pivotal role in
all steps of the reaction pathway, including substrate binding, catalysis, and product release …
all steps of the reaction pathway, including substrate binding, catalysis, and product release …
Revolutionizing enzyme engineering through artificial intelligence and machine learning
N Singh, S Malik, A Gupta… - Emerging Topics in Life …, 2021 - portlandpress.com
The combinatorial space of an enzyme sequence has astronomical possibilities and
exploring it with contemporary experimental techniques is arduous and often ineffective …
exploring it with contemporary experimental techniques is arduous and often ineffective …
Improving the Thermostability and Activity of Transaminase From Aspergillus terreus by Charge-Charge Interaction
JR Cao, FF Fan, CJ Lv, HP Wang, Y Li, S Hu… - Frontiers in …, 2021 - frontiersin.org
Transaminases that promote the amination of ketones into amines are an emerging class of
biocatalysts for preparing a series of drugs and their intermediates. One of the main …
biocatalysts for preparing a series of drugs and their intermediates. One of the main …
Efficient exploration of sequence space by sequence-guided protein engineering and design
The rapid growth of sequence databases over the past two decades means that protein
engineers faced with optimizing a protein for any given task will often have immediate …
engineers faced with optimizing a protein for any given task will often have immediate …
Membrane protein stabilization strategies for structural and functional studies
E Errasti-Murugarren, P Bartoccioni, M Palacín - Membranes, 2021 - mdpi.com
Accounting for nearly two-thirds of known druggable targets, membrane proteins are highly
relevant for cell physiology and pharmacology. In this regard, the structural determination of …
relevant for cell physiology and pharmacology. In this regard, the structural determination of …