Forest soil bacteria: diversity, involvement in ecosystem processes, and response to global change

S Lladó, R López-Mondéjar… - … and Molecular Biology …, 2017 - Am Soc Microbiol
The ecology of forest soils is an important field of research due to the role of forests as
carbon sinks. Consequently, a significant amount of information has been accumulated …

Forest microbiome: diversity, complexity and dynamics

P Baldrian - FEMS Microbiology reviews, 2017 - academic.oup.com
Globally, forests represent highly productive ecosystems that act as carbon sinks where soil
organic matter is formed from residuals after biomass decomposition as well as from …

High-throughput sequencing view on the magnitude of global fungal diversity

P Baldrian, T Větrovský, C Lepinay, P Kohout - Fungal Diversity, 2022 - Springer
High-throughput DNA sequencing has dramatically transformed several areas of biodiversity
research including mycology. Despite limitations, high-throughput sequencing is nowadays …

The role of microbial community in the decomposition of leaf litter and deadwood

A Bani, S Pioli, M Ventura, P Panzacchi, L Borruso… - Applied soil ecology, 2018 - Elsevier
Leaf litter and deadwood have important roles in the forest ecosystems, providing shelter for
several organisms, preventing erosion and microclimate fluctuations. Their decomposition is …

Drivers of microbial community structure in forest soils

S Lladó, R López-Mondéjar, P Baldrian - Applied microbiology and …, 2018 - Springer
Forests are essential biomes for global biogeochemical cycles, and belowground
microorganisms have a key role in providing relevant ecosystem services. To predict the …

[HTML][HTML] Current insight into traditional and modern methods in fungal diversity estimates

AK Gautam, RK Verma, S Avasthi, Sushma, Y Bohra… - Journal of Fungi, 2022 - mdpi.com
Fungi are an important and diverse component in various ecosystems. The methods to
identify different fungi are an important step in any mycological study. Classical methods of …

[HTML][HTML] A critical perspective on interpreting amplicon sequencing data in soil ecological research

LV Alteio, J Séneca, A Canarini, R Angel… - Soil Biology and …, 2021 - Elsevier
Microbial community analysis via marker gene amplicon sequencing has become a routine
method in the field of soil research. In this perspective, we discuss technical challenges and …

The known and the unknown in soil microbial ecology

P Baldrian - FEMS microbiology ecology, 2019 - academic.oup.com
The methodical developments in the fields of molecular biology and analytical chemistry
significantly increased the level of detail that we achieve when exploring soils and their …

Bacteria associated with decomposing dead wood in a natural temperate forest

V Tláskal, P Zrůstová, T Vrška… - FEMS Microbiology …, 2017 - academic.oup.com
Dead wood represents an important pool of organic matter in forests and is one of the
sources of soil formation. It has been shown to harbour diverse communities of bacteria, but …

Soybean root nodule and rhizosphere microbiome: Distribution of rhizobial and nonrhizobial endophytes

P Mayhood, BS Mirza - Applied and environmental microbiology, 2021 - Am Soc Microbiol
Soybean root nodules are known to contain a high diversity of both rhizobial endophytes
and nonrhizobial endophytes (NREs). Nevertheless, the variation of these bacteria among …