Mathematical modelling to study the horizontal transfer of antimicrobial resistance genes in bacteria: current state of the field and recommendations
QJ Leclerc, JA Lindsay… - Journal of the royal …, 2019 - royalsocietypublishing.org
Antimicrobial resistance (AMR) is one of the greatest public health challenges we are
currently facing. To develop effective interventions against this, it is essential to understand …
currently facing. To develop effective interventions against this, it is essential to understand …
[HTML][HTML] The ecology of plasmid-coded antibiotic resistance: a basic framework for experimental research and modeling
M Zwanzig - Computational and Structural Biotechnology Journal, 2021 - Elsevier
Many antibiotic resistance genes are associated with plasmids. The ecological success of
these mobile genetic elements within microbial communities depends on varying …
these mobile genetic elements within microbial communities depends on varying …
[HTML][HTML] Calibrating spatiotemporal models of microbial communities to microscopy data: A review
A Yip, J Smith-Roberge, SH Khorasani… - PLOS Computational …, 2022 - journals.plos.org
Spatiotemporal models that account for heterogeneity within microbial communities rely on
single-cell data for calibration and validation. Such data, commonly collected via microscopy …
single-cell data for calibration and validation. Such data, commonly collected via microscopy …
Prevalence of colistin-resistant Escherichia coli harbouring mcr-1 in raw beef and ready-to-eat beef products in Egypt
RF Sabala, M Usui, Y Tamura, SM Abd-Elghany… - Food Control, 2021 - Elsevier
The emergence of antibiotic-resistant bacteria in food, mainly contaminated meat and its
products, and their transfer to humans is of great concern. To evaluate the potential risk of …
products, and their transfer to humans is of great concern. To evaluate the potential risk of …
The conjugation window in an Escherichia coli K-12 strain with an IncFII plasmid
B Headd, SA Bradford - Applied and environmental microbiology, 2020 - Am Soc Microbiol
Many studies have examined the role that conjugation plays in disseminating antibiotic
resistance genes in bacteria. However, relatively little research has quantitively examined …
resistance genes in bacteria. However, relatively little research has quantitively examined …
Temperature and soil moisture change microbial allocation of pesticide‐derived carbon
J Wirsching, LC Rodriguez, F Ditterich… - European Journal of …, 2023 - Wiley Online Library
Temperature and soil moisture are known to control pesticide mineralization. Half‐life times
(DT 50 DT _ 50) derived from pesticide mineralization curves generally indicate longer …
(DT 50 DT _ 50) derived from pesticide mineralization curves generally indicate longer …
Gene-centric model approaches for accurate prediction of pesticide biodegradation in soils
Pesticides are widely used in agriculture despite their negative impact on ecosystems and
human health. Biogeochemical modeling facilitates the mechanistic understanding of …
human health. Biogeochemical modeling facilitates the mechanistic understanding of …
Tetrahymena promotes interactive transfer of carbapenemase gene encoded in plasmid between fecal Escherichia coli and environmental Aeromonas caviae
M Matsushita, T Okubo, T Hasegawa… - Microbiology and …, 2018 - Wiley Online Library
Tetrahymena can facilitate plasmid transfer among Escherichia coli or from E. coli to
Salmonella Enteritidis via vesicle accumulation. In this study, whether ciliates promote the …
Salmonella Enteritidis via vesicle accumulation. In this study, whether ciliates promote the …
[HTML][HTML] A streamlined approach for fluorescence labelling of low-copy-number plasmids for determination of conjugation frequency by flow cytometry
Q Qi, M Kamruzzaman, JR Iredell - Microorganisms, 2023 - mdpi.com
Bacterial conjugation plays a major role in the dissemination of antibiotic resistance and
virulence traits through horizontal transfer of plasmids. Robust measurement of conjugation …
virulence traits through horizontal transfer of plasmids. Robust measurement of conjugation …
Parameter Estimation of the Potassium Channel in the Hodgkin-Huxley Model
P Yue - 2024 - atrium.lib.uoguelph.ca
In this thesis, we constructed two methods, one using Differential Evolution (DE) and one
using a Feedforward Neural Network (FNN), to estimate the Potassium channel parameters …
using a Feedforward Neural Network (FNN), to estimate the Potassium channel parameters …