Characterizing cis-regulatory elements using single-cell epigenomics

S Preissl, KJ Gaulton, B Ren - Nature Reviews Genetics, 2023 - nature.com
Cell type-specific gene expression patterns and dynamics during development or in disease
are controlled by cis-regulatory elements (CREs), such as promoters and enhancers …

Interpreting non-coding disease-associated human variants using single-cell epigenomics

KJ Gaulton, S Preissl, B Ren - Nature Reviews Genetics, 2023 - nature.com
Genome-wide association studies (GWAS) have linked hundreds of thousands of sequence
variants in the human genome to common traits and diseases. However, translating this …

[HTML][HTML] An Evidence-Based Narrative Review of Mechanisms of Resistance Exercise–Induced Human Skeletal Muscle Hypertrophy

C Lim, EA Nunes, BS Currier, JC Mcleod… - Medicine and science …, 2022 - ncbi.nlm.nih.gov
Skeletal muscle plays a critical role in physical function and metabolic health. Muscle is a
highly adaptable tissue that responds to resistance exercise (RE; loading) by …

[PDF][PDF] Single-nucleus profiling unveils a geroprotective role of the FOXO3 in primate skeletal muscle aging

Y Jing, Y Zuo, Y Yu, L Sun, Z Yu, S Ma, Q Zhao… - Protein & …, 2023 - academic.oup.com
Age-dependent loss of skeletal muscle mass and function is a feature of sarcopenia, and
increases the risk of many aging-related metabolic diseases. Here, we report phenotypic …

The myonuclear domain in adult skeletal muscle fibres: past, present and future

JR Bagley, LT Denes, JJ McCarthy… - The Journal of …, 2023 - Wiley Online Library
Most cells in the body are mononuclear whereas skeletal muscle fibres are uniquely
multinuclear. The nuclei of muscle fibres (myonuclei) are usually situated peripherally which …

Heterogeneous skeletal muscle cell and nucleus populations identified by single-cell and single-nucleus resolution transcriptome assays

K Williams, K Yokomori, A Mortazavi - Frontiers in Genetics, 2022 - frontiersin.org
Single-cell RNA-seq (scRNA-seq) has revolutionized modern genomics, but the large size of
myotubes and myofibers has restricted use of scRNA-seq in skeletal muscle. For the study of …

Muscle aging and sarcopenia: The pathology, etiology, and most promising therapeutic targets

M Grima-Terrén, S Campanario… - Molecular Aspects of …, 2024 - Elsevier
Sarcopenia is a progressive muscle wasting disorder that severely impacts the quality of life
of elderly individuals. Although the natural aging process primarily causes sarcopenia, it can …

[HTML][HTML] Single nuclei profiling identifies cell specific markers of skeletal muscle aging, frailty, and senescence

K Perez, S Ciotlos, J McGirr, C Limbad, R Doi… - Aging (Albany …, 2022 - ncbi.nlm.nih.gov
Aging is accompanied by a loss of muscle mass and function, termed sarcopenia, which
causes numerous morbidities and economic burdens in human populations. Mechanisms …

Single nuclei transcriptomics of muscle reveals intra-muscular cell dynamics linked to dystrophin loss and rescue

DD Scripture-Adams, KN Chesmore… - Communications …, 2022 - nature.com
In Duchenne muscular dystrophy, dystrophin loss leads to chronic muscle damage,
dysregulation of repair, fibro-fatty replacement, and weakness. We develop methodology to …

Challenges and perspectives in applying single nuclei RNA-seq technology in plant biology

SA Cervantes-Pérez, S Thibivillliers, S Tennant… - Plant Science, 2022 - Elsevier
Plant single-cell RNA-seq technology quantifies the abundance of plant transcripts at a
single-cell resolution. Deciphering the transcriptomes of each plant cell, their regulation …