Implications of streamlining theory for microbial ecology
SJ Giovannoni, J Cameron Thrash… - The ISME …, 2014 - academic.oup.com
Whether a small cell, a small genome or a minimal set of chemical reactions with self-
replicating properties, simplicity is beguiling. As Leonardo da Vinci reportedly said,'simplicity …
replicating properties, simplicity is beguiling. As Leonardo da Vinci reportedly said,'simplicity …
SAR11 bacteria: the most abundant plankton in the oceans
SJ Giovannoni - Annual review of marine science, 2017 - annualreviews.org
SAR11 is a group of small, carbon-oxidizing bacteria that reach a global estimated
population size of 2.4× 1028 cells—approximately 25% of all plankton. They are found …
population size of 2.4× 1028 cells—approximately 25% of all plankton. They are found …
Every base matters: assessing small subunit rRNA primers for marine microbiomes with mock communities, time series and global field samples
AE Parada, DM Needham… - Environmental …, 2016 - Wiley Online Library
Microbial community analysis via high‐throughput sequencing of amplified 16S rRNA genes
is an essential microbiology tool. We found the popular primer pair 515F (515F‐C) and …
is an essential microbiology tool. We found the popular primer pair 515F (515F‐C) and …
Minor revision to V4 region SSU rRNA 806R gene primer greatly increases detection of SAR11 bacterioplankton
High-throughput sequencing of small subunit ribosomal RNA (SSU rRNA) genes from
marine environments is a widely applied method used to uncover the composition of …
marine environments is a widely applied method used to uncover the composition of …
Recalcitrant dissolved organic carbon fractions
DA Hansell - Annual review of marine science, 2013 - annualreviews.org
Marine dissolved organic carbon (DOC) exhibits a spectrum of reactivity, from very fast
turnover of the most bioavailable forms in the surface ocean to long-lived materials …
turnover of the most bioavailable forms in the surface ocean to long-lived materials …
Marine bacterial, archaeal and protistan association networks reveal ecological linkages
Microbes have central roles in ocean food webs and global biogeochemical processes, yet
specific ecological relationships among these taxa are largely unknown. This is in part due …
specific ecological relationships among these taxa are largely unknown. This is in part due …
[HTML][HTML] Marine bacterioplankton seasonal succession dynamics
C Bunse, J Pinhassi - Trends in microbiology, 2017 - cell.com
Bacterioplankton (bacteria and archaea) are indispensable regulators of global element
cycles owing to their unique ability to decompose and remineralize dissolved organic matter …
cycles owing to their unique ability to decompose and remineralize dissolved organic matter …
Seasonal and interannual variability of the marine bacterioplankton community throughout the water column over ten years
Microbial activities that affect global oceanographic and atmospheric processes happen
throughout the water column, yet the long-term ecological dynamics of microbes have been …
throughout the water column, yet the long-term ecological dynamics of microbes have been …
Microbial metatranscriptomics in a permanent marine oxygen minimum zone
Simultaneous characterization of taxonomic composition, metabolic gene content and gene
expression in marine oxygen minimum zones (OMZs) has potential to broaden perspectives …
expression in marine oxygen minimum zones (OMZs) has potential to broaden perspectives …
Seasonality in ocean microbial communities
SJ Giovannoni, KL Vergin - Science, 2012 - science.org
Ocean warming occurs every year in seasonal cycles that can help us to understand long-
term responses of plankton to climate change. Rhythmic seasonal patterns of microbial …
term responses of plankton to climate change. Rhythmic seasonal patterns of microbial …