Enumerating molecules

JL Faulon, DP Visco Jr, D Roe - Reviews in computational …, 2005 - Wiley Online Library
Chapter 3 introduces the important but obscure topic of enumerating molecules.
Enumeration means two things: first to list things separately, one by one and second to …

Systematic generation of chemical structures for rational drug design based on QSAR models

K Funatsu, T Miyao, M Arakawa - Current Computer-Aided Drug …, 2011 - ingentaconnect.com
The first step in the process of drug development is to determine those lead compounds that
demonstrate significant biological activity with regard to a target protein. Because this …

Notes on constant-isomer series

JR Dias - Journal of chemical information and computer sciences, 1993 - ACS Publications
Constant-isomer series are polycyclic aromatic hydrocarbon sets having equal numbers of
isomers. While presenting an overview of constant-isomer series, generalalgebraic …

Exhaustive generation of organic isomers. 3. Acyclic, cyclic, and mixed compounds

ML Contreras, R Rozas, R Valdivia - Journal of Chemical …, 1994 - ACS Publications
A program has been designed which allows for the exhaustiveand nonredundant generation
and enumeration of organic compounds with cyclic, acyclic, and mixed structures which may …

Principles for structure generation of organic isomers from molecular formula

CY Hu, L Xu - Analytica chimica acta, 1994 - Elsevier
An expert system for the elucidation of the structure of organic compounds (ESESOC) has
been developed. The heart of the ESESOC is formed by the structure generator as an …

Structure generation by the combination of structure reduction and structure assembly

S Bohanec - Journal of chemical information and computer …, 1995 - ACS Publications
A new method of structure generation, involving two steps, structure reduction and structure
assembly, is presented. The goal of structure reduction is to reduce the number of …

Exhaustive Generation of Organic Isomers. 6. Stereoisomers Having Isolated and Spiro Cycles and New Extended N_Tuples

ML Contreras, J Alvarez, M Riveros… - Journal of Chemical …, 2001 - ACS Publications
A new stereoisomer generation system named CAMGEC2 for generation of stereoisomers
containing isolated and spiro cycles with one or more descriptors among R, S, Z, E, M, and P …

Algorithm for exhaustive and nonredundant organic stereoisomer generation

ML Contreras, J Alvarez, D Guajardo… - Journal of chemical …, 2006 - ACS Publications
Generation of organic stereoisomers with R/S, Z/E, and/or M/P configurations that may
contain heteroatoms, multiple bonds, and any kind of cycle (isolated, spiro, condensed, and …

Exhaustive generation of organic isomers. 5. Unsaturated optical and geometrical stereoisomers and a new CIP subrule

ML Contreras, GM Trevisiol, J Alvarez… - Journal of chemical …, 1999 - ACS Publications
This work, based on graph theory, presents a US-CAMGEC software developed for analysis,
generation, and counting organic unsaturated stereoisomers with isolated or cumulated …

A Compact code for chemical structure storage and retrieval

S Igor - Journal of chemical information and computer sciences, 1995 - ACS Publications
Almost every chemical information system uses chemical structure handling. The exploration
of large data bases on chemical properties requires compact storage and fastsearch-ing of …