Protein analysis by shotgun/bottom-up proteomics
According to Genome Sequencing Project statistics (http://www. ncbi. nlm. nih.
gov/genomes/static/gpstat. html), as of February 16, 2012, complete gene sequences have …
gov/genomes/static/gpstat. html), as of February 16, 2012, complete gene sequences have …
Affinity‐purification coupled to mass spectrometry: Basic principles and strategies
WH Dunham, M Mullin, AC Gingras - Proteomics, 2012 - Wiley Online Library
Identifying the interactions established by a protein of interest can be a critical step in
understanding its function. This is especially true when an unknown protein of interest is …
understanding its function. This is especially true when an unknown protein of interest is …
AF2Complex predicts direct physical interactions in multimeric proteins with deep learning
Accurate descriptions of protein-protein interactions are essential for understanding
biological systems. Remarkably accurate atomic structures have been recently computed for …
biological systems. Remarkably accurate atomic structures have been recently computed for …
High-quality binary protein interaction map of the yeast interactome network
Current yeast interactome network maps contain several hundred molecular complexes with
limited and somewhat controversial representation of direct binary interactions. We carried …
limited and somewhat controversial representation of direct binary interactions. We carried …
SSB as an organizer/mobilizer of genome maintenance complexes
RD Shereda, AG Kozlov, TM Lohman… - Critical reviews in …, 2008 - Taylor & Francis
When duplex DNA is altered in almost any way (replicated, recombined, or repaired), single
strands of DNA are usually intermediates, and single-stranded DNA binding (SSB) proteins …
strands of DNA are usually intermediates, and single-stranded DNA binding (SSB) proteins …
Proteome organization in a genome-reduced bacterium
The genome of Mycoplasma pneumoniae is among the smallest found in self-replicating
organisms. To study the basic principles of bacterial proteome organization, we used …
organisms. To study the basic principles of bacterial proteome organization, we used …
Building Fe–S proteins: bacterial strategies
B Py, F Barras - Nature Reviews Microbiology, 2010 - nature.com
The broad range of cellular activities carried out by Fe–S proteins means that they have a
central role in the life of most organisms. At the interface between biology and chemistry …
central role in the life of most organisms. At the interface between biology and chemistry …
The binary protein-protein interaction landscape of Escherichia coli
SV Rajagopala, P Sikorski, A Kumar, R Mosca… - Nature …, 2014 - nature.com
Efforts to map the Escherichia coli interactome have identified several hundred
macromolecular complexes, but direct binary protein-protein interactions (PPIs) have not …
macromolecular complexes, but direct binary protein-protein interactions (PPIs) have not …
[图书][B] Structure and function of intrinsically disordered proteins
The existence and functioning of intrinsically disordered proteins (IDPs) challenge the
classical structure-function paradigm that equates function with a well-defined 3D structure …
classical structure-function paradigm that equates function with a well-defined 3D structure …
Global functional atlas of Escherichia coli encompassing previously uncharacterized proteins
One-third of the 4,225 protein-coding genes of Escherichia coli K-12 remain functionally
unannotated (orphans). Many map to distant clades such as Archaea, suggesting …
unannotated (orphans). Many map to distant clades such as Archaea, suggesting …