Strengths and limitations of 16S rRNA gene amplicon sequencing in revealing temporal microbial community dynamics

R Poretsky, LM Rodriguez-R, C Luo, D Tsementzi… - PloS one, 2014 - journals.plos.org
This study explored the short-term planktonic microbial community structure and resilience
in Lake Lanier (GA, USA) while simultaneously evaluating the technical aspects of …

An introduction to the biogeography of aquatic microbes

JR Dolan - Aquatic Microbial Ecology, 2005 - int-res.com
Aquatic microbes, like all organisms, have biogeographies, but this subject has attracted
relatively little attention. In this review, recent results exploiting techniques of molecular …

Wastewater as a point source of antibiotic-resistance genes in the sediment of a freshwater lake

N Czekalski, E Gascón Díez, H Bürgmann - The ISME journal, 2014 - academic.oup.com
Antibiotic-resistance genes (ARGs) are currently discussed as emerging environmental
contaminants. Hospital and municipal sewage are important sources of ARGs for the …

Strong impact of anthropogenic contamination on the co‐occurrence patterns of a riverine microbial community

A Hu, F Ju, L Hou, J Li, X Yang, H Wang… - Environmental …, 2017 - Wiley Online Library
Although the health of rivers is threatened by multiple anthropogenic stressors with
increasing frequency, it remains an open question how riverine microbial communities …

Microbial contributions to phosphorus cycling in eutrophic lakes and wastewater

KD McMahon, EK Read - Annual review of microbiology, 2013 - annualreviews.org
Phosphorus is a key element controlling the productivity of freshwater ecosystems, and
microbes drive most of its relevant biogeochemistry. Eutrophic lakes are generally …

Coherent dynamics and association networks among lake bacterioplankton taxa

A Eiler, F Heinrich, S Bertilsson - The ISME journal, 2012 - academic.oup.com
Bacteria have important roles in freshwater food webs and in the cycling of elements in the
ecosystem. Yet specific ecological features of individual phylogenetic groups and …

Does human activity impact the natural antibiotic resistance background? Abundance of antibiotic resistance genes in 21 Swiss lakes

N Czekalski, R Sigdel, J Birtel, B Matthews… - Environment …, 2015 - Elsevier
Antibiotic resistance genes (ARGs) are emerging environmental contaminants, known to be
continuously discharged into the aquatic environment via human and animal waste …

Annually reoccurring bacterial communities are predictable from ocean conditions

JA Fuhrman, I Hewson… - Proceedings of the …, 2006 - National Acad Sciences
Factors influencing patterns in the distribution and abundance of plant and animal taxa
modulate ecosystem function and ecosystem response to environmental change, which is …

Strong linkages between dissolved organic matter and the aquatic bacterial community in an urban river

L Zhang, W Fang, X Li, W Lu, J Li - Water Research, 2020 - Elsevier
Aquatic bacterial communities play an important role in biogeochemical cycling in river
ecosystems; however, knowledge of the linkages between bacterial communities and …

Geographic and environmental sources of variation in lake bacterial community composition

AC Yannarell, EW Triplett - Applied and environmental …, 2005 - Am Soc Microbiol
This study used a genetic fingerprinting technique (automated ribosomal intergenic spacer
analysis [ARISA]) to characterize microbial communities from a culture-independent …