[HTML][HTML] Bacterial sigma factors and anti-sigma factors: structure, function and distribution

MS Paget - Biomolecules, 2015 - mdpi.com
Sigma factors are multi-domain subunits of bacterial RNA polymerase (RNAP) that play
critical roles in transcription initiation, including the recognition and opening of promoters as …

Bacterial sigma factors: a historical, structural, and genomic perspective

A Feklístov, BD Sharon, SA Darst… - Annual review of …, 2014 - annualreviews.org
Transcription initiation is the crucial focal point of gene expression in prokaryotes. The key
players in this process, sigma factors (σs), associate with the catalytic core RNA polymerase …

Signaling diversity and evolution of extracytoplasmic function (ECF) σ factors

T Mascher - Current opinion in microbiology, 2013 - Elsevier
Extracytoplasmic function σ factors (ECFs) represent a fundamental and widely distributed
principle of bacterial signal transduction that connects the perception of a stimulus (input) …

[HTML][HTML] Global mapping of transcription start sites and promoter motifs in the symbiotic α-proteobacterium Sinorhizobium meliloti1021

JP Schlüter, J Reinkensmeier, MJ Barnett, C Lang… - BMC genomics, 2013 - Springer
Background Sinorhizobium meliloti is a soil-dwelling α-proteobacterium that possesses a
large, tripartite genome and engages in a nitrogen fixing symbiosis with its plant hosts …

[HTML][HTML] Past, present, and future of extracytoplasmic function σ factors: distribution and regulatory diversity of the third pillar of bacterial signal transduction

T Mascher - Annual Review of Microbiology, 2023 - annualreviews.org
Responding to environmental cues is a prerequisite for survival in the microbial world.
Extracytoplasmic function σ factors (ECFs) represent the third most abundant and by far the …

Themes and variations in gene regulation by extracytoplasmic function (ECF) sigma factors

E Sineva, M Savkina, SE Ades - Current opinion in microbiology, 2017 - Elsevier
Highlights•Major themes shared by ECF sigma factors are highlighted.•The mechanisms of
promoter recognition are conserved among ECF sigma factors.•Most ECF sigmas are …

Expansion and re-classification of the extracytoplasmic function (ECF) σ factor family

D Casas-Pastor, RR Müller, S Jaenicke… - Nucleic acids …, 2021 - academic.oup.com
Extracytoplasmic function σ factors (ECFs) represent one of the major bacterial signal
transduction mechanisms in terms of abundance, diversity and importance, particularly in …

[HTML][HTML] The LIKE system, a novel protein expression toolbox for Bacillus subtilis based on the liaI promoter

AA Toymentseva, K Schrecke, MR Sharipova… - Microbial Cell …, 2012 - Springer
Background Bacillus subtilis is a very important Gram-positive model organism of high
biotechnological relevance, which is widely used as a host for the production of both …

Engineering orthogonal synthetic timer circuits based on extracytoplasmic function σ factors

D Pinto, S Vecchione, H Wu, M Mauri… - Nucleic Acids …, 2018 - academic.oup.com
The rational design of synthetic regulatory circuits critically hinges on the availability of
orthogonal and well-characterized building blocks. Here, we focus on extracytoplasmic …

Transcriptional regulation by σ factor phosphorylation in bacteria

SC Iyer, D Casas-Pastor, D Kraus, P Mann… - Nature …, 2020 - nature.com
A major form of transcriptional regulation in bacteria occurs through the exchange of the
primary σ factor of RNA polymerase (RNAP) with an alternative extracytoplasmic function …