Evolving and sustaining ocean best practices and standards for the next decade
J Pearlman, M Bushnell, L Coppola… - Frontiers in Marine …, 2019 - frontiersin.org
The oceans play a key role in global issues such as climate change, food security, and
human health. Given their vast dimensions and internal complexity, efficient monitoring and …
human health. Given their vast dimensions and internal complexity, efficient monitoring and …
Emerging vaccine informatics
Vaccine informatics is an emerging research area that focuses on development and
applications of bioinformatics methods that can be used to facilitate every aspect of the …
applications of bioinformatics methods that can be used to facilitate every aspect of the …
The immune epitope database (IEDB) 3.0
R Vita, JA Overton, JA Greenbaum… - Nucleic acids …, 2015 - academic.oup.com
The IEDB, www. iedb. org, contains information on immune epitopes—the molecular targets
of adaptive immune responses—curated from the published literature and submitted by …
of adaptive immune responses—curated from the published literature and submitted by …
Uberon, an integrative multi-species anatomy ontology
We present Uberon, an integrated cross-species ontology consisting of over 6,500 classes
representing a variety of anatomical entities, organized according to traditional anatomical …
representing a variety of anatomical entities, organized according to traditional anatomical …
The cancer epitope database and analysis resource (CEDAR)
Z Koşaloğlu-Yalçın, N Blazeska, R Vita… - Nucleic acids …, 2023 - academic.oup.com
Abstract We established The Cancer Epitope Database and Analysis Resource (CEDAR) to
catalog all epitope data in the context of cancer. The specific molecular targets of adaptive T …
catalog all epitope data in the context of cancer. The specific molecular targets of adaptive T …
The Cell Ontology 2016: enhanced content, modularization, and ontology interoperability
Abstract Background The Cell Ontology (CL) is an OBO Foundry candidate ontology
covering the domain of canonical, natural biological cell types. Since its inception in 2005 …
covering the domain of canonical, natural biological cell types. Since its inception in 2005 …
The Semanticscience Integrated Ontology (SIO) for biomedical research and knowledge discovery
Abstract The Semanticscience Integrated Ontology (SIO) is an ontology to facilitate
biomedical knowledge discovery. SIO features a simple upper level comprised of essential …
biomedical knowledge discovery. SIO features a simple upper level comprised of essential …
Patterns and severity of vincristine‐induced peripheral neuropathy in children with acute lymphoblastic leukemia
Vincristine, a critical component of combination chemotherapy treatment for pediatric acute
lymphoblastic leukemia (ALL), can lead to vincristine‐induced peripheral neuropathy …
lymphoblastic leukemia (ALL), can lead to vincristine‐induced peripheral neuropathy …
[HTML][HTML] Using a suite of ontologies for preserving workflow-centric research objects
Scientific workflows are a popular mechanism for specifying and automating data-driven in
silico experiments. A significant aspect of their value lies in their potential to be reused. Once …
silico experiments. A significant aspect of their value lies in their potential to be reused. Once …
Finding our way through phenotypes
Despite a large and multifaceted effort to understand the vast landscape of phenotypic data,
their current form inhibits productive data analysis. The lack of a community-wide …
their current form inhibits productive data analysis. The lack of a community-wide …