Conservation biology needs a microbial renaissance: a call for the consideration of host-associated microbiota in wildlife management practices

BK Trevelline, SS Fontaine… - Proceedings of the …, 2019 - royalsocietypublishing.org
The central aim of conservation biology is to understand and mitigate the effects of human
activities on biodiversity. To successfully achieve this objective, researchers must take an …

Inferring microbiota functions from taxonomic genes: a review

C Djemiel, PA Maron, S Terrat, S Dequiedt… - …, 2022 - academic.oup.com
Deciphering microbiota functions is crucial to predict ecosystem sustainability in response to
global change. High-throughput sequencing at the individual or community level has …

[HTML][HTML] Fungal-bacterial diversity and microbiome complexity predict ecosystem functioning

C Wagg, K Schlaeppi, S Banerjee, EE Kuramae… - Nature …, 2019 - nature.com
The soil microbiome is highly diverse and comprises up to one quarter of Earth's diversity.
Yet, how such a diverse and functionally complex microbiome influences ecosystem …

[HTML][HTML] Standardized multi-omics of Earth's microbiomes reveals microbial and metabolite diversity

JP Shaffer, LF Nothias, LR Thompson, JG Sanders… - Nature …, 2022 - nature.com
Despite advances in sequencing, lack of standardization makes comparisons across studies
challenging and hampers insights into the structure and function of microbial communities …

Linking bacterial community composition to soil salinity along environmental gradients

KM Rath, N Fierer, DV Murphy, J Rousk - The ISME journal, 2019 - academic.oup.com
Salinization is recognized as a threat to soil fertility worldwide. A challenge in understanding
the effects of salinity on soil microbial communities is the fact that it can be difficult to …

Fundamental research questions in subterranean biology

S Mammola, IR Amorim, ME Bichuette… - Biological …, 2020 - Wiley Online Library
Five decades ago, a landmark paper in Science titled The Cave Environment heralded
caves as ideal natural experimental laboratories in which to develop and address general …

The temperature dependence of microbial community respiration is amplified by changes in species interactions

FC García, T Clegg, DB O'Neill, R Warfield… - Nature …, 2023 - nature.com
Respiratory release of CO2 by microorganisms is one of the main components of the global
carbon cycle. However, there are large uncertainties regarding the effects of climate …

Build your own soil: exploring microfluidics to create microbial habitat structures

K Aleklett, ET Kiers, P Ohlsson, TS Shimizu… - The ISME …, 2018 - academic.oup.com
Soil is likely the most complex ecosystem on earth. Despite the global importance and
extraordinary diversity of soils, they have been notoriously challenging to study. We show …

Functional traits resolve mechanisms governing the assembly and distribution of nitrogen-cycling microbial communities in the global ocean

W Song, J Liu, W Qin, J Huang, X Yu, M Xu, D Stahl… - MBio, 2022 - Am Soc Microbiol
Microorganisms drive much of the marine nitrogen (N) cycle, which jointly controls the
primary production in the global ocean. However, our understanding of the microbial …

A framework for soil microbial ecology in urban ecosystems

A Nugent, SD Allison - Ecosphere, 2022 - Wiley Online Library
Nearly all ecosystems host diverse microbiomes that support vital ecosystem processes. At
the same time, these ecosystems and their microbiomes are increasingly altered by human …