Toward defining deep brain stimulation targets in MNI space: a subcortical atlas based on multimodal MRI, histology and structural connectivity

S Ewert, P Plettig, N Li, MM Chakravarty, DL Collins… - Neuroimage, 2018 - Elsevier
Three-dimensional atlases of subcortical brain structures are valuable tools to reference
anatomy in neuroscience and neurology. For instance, they can be used to study the …

[HTML][HTML] What's new and what's next in diffusion MRI preprocessing

CMW Tax, M Bastiani, J Veraart, E Garyfallidis… - NeuroImage, 2022 - Elsevier
Diffusion MRI (dMRI) provides invaluable information for the study of tissue microstructure
and brain connectivity, but suffers from a range of imaging artifacts that greatly challenge the …

Epidural stimulation of the cervical spinal cord for post-stroke upper-limb paresis

MP Powell, N Verma, E Sorensen, E Carranza… - Nature medicine, 2023 - nature.com
Cerebral strokes can disrupt descending commands from motor cortical areas to the spinal
cord, which can result in permanent motor deficits of the arm and hand. However, below the …

Lead-DBS v2: Towards a comprehensive pipeline for deep brain stimulation imaging

A Horn, N Li, TA Dembek, A Kappel, C Boulay, S Ewert… - Neuroimage, 2019 - Elsevier
Deep brain stimulation (DBS) is a highly efficacious treatment option for movement disorders
and a growing number of other indications are investigated in clinical trials. To ensure …

Optimal deep brain stimulation sites and networks for stimulation of the fornix in Alzheimer's disease

AS Ríos, S Oxenford, C Neudorfer, K Butenko… - Nature …, 2022 - nature.com
Deep brain stimulation (DBS) to the fornix is an investigational treatment for patients with
mild Alzheimer's Disease. Outcomes from randomized clinical trials have shown that …

QSIPrep: an integrative platform for preprocessing and reconstructing diffusion MRI data

M Cieslak, PA Cook, X He, FC Yeh, T Dhollander… - Nature …, 2021 - nature.com
Diffusion-weighted magnetic resonance imaging (dMRI) is the primary method for
noninvasively studying the organization of white matter in the human brain. Here we …

Population-averaged atlas of the macroscale human structural connectome and its network topology

FC Yeh, S Panesar, D Fernandes, A Meola, M Yoshino… - Neuroimage, 2018 - Elsevier
A comprehensive map of the structural connectome in the human brain has been a coveted
resource for understanding macroscopic brain networks. Here we report an expert-vetted …

Anatomy and white matter connections of the lingual gyrus and cuneus

AH Palejwala, NB Dadario, IM Young, K O'Connor… - World neurosurgery, 2021 - Elsevier
Background The medial occipital lobe, composed of the lingual gyrus and cuneus, is
necessary for both basic and higher level visual processing. It is also known to facilitate …

Dipy, a library for the analysis of diffusion MRI data

E Garyfallidis, M Brett, B Amirbekian… - Frontiers in …, 2014 - frontiersin.org
Diffusion Imaging in Python (Dipy) is a free and open source software project for the analysis
of data from diffusion magnetic resonance imaging (dMRI) experiments. dMRI is an …

Deterministic diffusion fiber tracking improved by quantitative anisotropy

FC Yeh, TD Verstynen, Y Wang… - PloS one, 2013 - journals.plos.org
Diffusion MRI tractography has emerged as a useful and popular tool for mapping
connections between brain regions. In this study, we examined the performance of …