Development of a universal microarray based on the ligation detection reaction and 16S rRNA gene polymorphism to target diversity of cyanobacteria

B Castiglioni, E Rizzi, A Frosini, K Sivonen… - Applied and …, 2004 - Am Soc Microbiol
The cyanobacteria are photosynthetic prokaryotes of significant ecological and
biotechnological interest, since they strongly contribute to primary production and are a rich …

[HTML][HTML] Development of a single nucleotide polymorphism genotyping microarray platform for the identification of bovine milk protein genetic polymorphisms

S Chessa, F Chiatti, G Ceriotti, A Caroli… - Journal of dairy …, 2007 - Elsevier
The objective of this study was to develop and validate a fast method for typing the main
mutations of bovine milk protein genes by using microarray technology. An approach based …

Identification of single-nucleotide polymorphisms by the oligonucleotide ligation reaction: a DNA biosensor for simultaneous visual detection of both alleles

DK Toubanaki, TK Christopoulos, PC Ioannou… - Analytical …, 2009 - ACS Publications
Although single nucleotide polymorphisms (SNPs) can be identified by direct hybridization
with allele-specific oligonucleotide probes, enzyme-based genotyping methods offer much …

Olive variety identification by ligation detection reaction in a universal array format

C Consolandi, L Palmieri, S Doveri, E Maestri… - Journal of …, 2007 - Elsevier
Molecular methodologies are increasingly being developed to assess the origin and
authenticity of raw organic materials and processed food products. Here we describe the …

A microarray platform for parallel detection of five transgenic events in foods: a combined Polymerase Chain Reaction− ligation detection reaction− universal array …

R Bordoni, A Germini, A Mezzelani… - Journal of Agricultural …, 2005 - ACS Publications
We recently developed a multiplex polymerase chain reaction (PCR) system for the
simultaneous detection of four transgenic maize (MON810, Bt176, Bt11, and GA21), one …

A rapid and simple method for DNA engineering using cycled ligation assembly

TL Roth, L Milenkovic, MP Scott - PloS one, 2014 - journals.plos.org
DNA assembly techniques have developed rapidly, enabling efficient construction of
complex constructs that would be prohibitively difficult using traditional restriction-digest …

A nanoparticle-based sensor for visual detection of multiple mutations

DS Elenis, PC Ioannou, TK Christopoulos - Nanotechnology, 2011 - iopscience.iop.org
Disposable dipstick-type DNA biosensors in the form of lateral flow strips are particularly
useful for genotyping in a small laboratory or for field testing due to their simplicity, low cost …

Algorithm for automatic genotype calling of single nucleotide polymorphisms using the full course of TaqMan real-time data

A Callegaro, R Spinelli, L Beltrame… - Nucleic Acids …, 2006 - academic.oup.com
Single nucleotide polymorphisms (SNPs) are often determined using TaqMan real-time PCR
assays (Applied Biosystems) and commercial software that assigns genotypes based on …

A structured chitosan-based platform for biomolecule attachment to solid surfaces: application to DNA microarray preparation

C Consolandi, M Severgnini, B Castiglioni… - Bioconjugate …, 2006 - ACS Publications
A structured chemical platform based on chitosan, an amine-rich polysaccharide, is
presented as an alternative chemistry to functionalize solid support (in this case, glass …

ORMA: a tool for identification of species-specific variations in 16S rRNA gene and oligonucleotides design

M Severgnini, P Cremonesi, C Consolandi… - Nucleic acids …, 2009 - academic.oup.com
Abstract 16S rRNA gene is one of the preferred targets for resolving species phylogenesis
issues in microbiological-related contexts. However, the identification of single-nucleotide …