Plant peroxisomes: biogenesis and function

J Hu, A Baker, B Bartel, N Linka, RT Mullen… - The Plant …, 2012 - academic.oup.com
Peroxisomes are eukaryotic organelles that are highly dynamic both in morphology and
metabolism. Plant peroxisomes are involved in numerous processes, including primary and …

Differential proteomics: an overview of gel and non-gel based approaches

L Monteoliva, JP Albar - Briefings in Functional Genomics, 2004 - academic.oup.com
The comprehensive analysis of gene expression in complex biological systems has
demanded the development of new technologies to study the cell transcriptome and the cell …

Proteomic mapping of the human mitochondrial intermembrane space in live cells via ratiometric APEX tagging

V Hung, P Zou, HW Rhee, ND Udeshi, V Cracan… - Molecular cell, 2014 - cell.com
Obtaining complete protein inventories for subcellular regions is a challenge that often limits
our understanding of cellular function, especially for regions that are impossible to purify and …

Mapping the Arabidopsis organelle proteome

TPJ Dunkley, S Hester, IP Shadforth… - Proceedings of the …, 2006 - National Acad Sciences
A challenging task in the study of the secretory pathway is the identification and localization
of new proteins to increase our understanding of the functions of different organelles …

Localization of organelle proteins by isotope tagging (LOPIT)

TPJ Dunkley, R Watson, JL Griffin, P Dupree… - Molecular & Cellular …, 2004 - ASBMB
We describe a proteomics method for determining the subcellular localization of membrane
proteins. Organelles are partially separated using centrifugation through self-generating …

Proteomics characterization of mouse kidney peroxisomes by tandem mass spectrometry and protein correlation profiling

S Wiese, T Gronemeyer, R Ofman, M Kunze… - Molecular & cellular …, 2007 - ASBMB
The peroxisome represents a ubiquitous single membrane-bound key organelle that
executes various metabolic pathways such as fatty acid degradation by α-and β-oxidation …

Plant proteome analysis: a 2004–2006 update

M Rossignol, JB Peltier, HP Mock, A Matros… - …, 2006 - Wiley Online Library
Since the appearance of the review entitled “Plant Proteome Analysis” in Proteomics in
February 2004 (Cánovas, FM, Dumas‐Gaudot, E., Recorbert, G., Jorrín, J. et al., Proteomics …

The role of mass spectrometry in plant systems biology

M Glinski, W Weckwerth - Mass spectrometry reviews, 2006 - Wiley Online Library
Large‐scale analyses of proteins and metabolites are intimately bound to advancements in
MS technologies. The aim of these non‐targeted “omic” technologies is to extend our …

Proteomic analysis of nipple aspirate fluid from women with early-stage breast cancer using isotope-coded affinity tags and tandem mass spectrometry reveals …

TM Pawlik, DH Hawke, Y Liu, S Krishnamurthy… - BMC cancer, 2006 - Springer
Background Isotope-coded affinity tag (ICAT) tandem mass spectrometry (MS) allows for
qualitative and quantitative analysis of paired protein samples. We sought to determine …

Arabidopsis XXT5 gene encodes a putative α‐1,6‐xylosyltransferase that is involved in xyloglucan biosynthesis

OA Zabotina, WTG Van De Ven, G Freshour… - The Plant …, 2008 - Wiley Online Library
The function of a putative xyloglucan xylosyltransferase from Arabidopsis thaliana
(At1g74380; XXT5) was studied. The XXT5 gene is expressed in all plant tissues, with …