Artificial intelligence to deep learning: machine intelligence approach for drug discovery

R Gupta, D Srivastava, M Sahu, S Tiwari, RK Ambasta… - Molecular …, 2021 - Springer
Drug designing and development is an important area of research for pharmaceutical
companies and chemical scientists. However, low efficacy, off-target delivery, time …

Ligands of adrenergic receptors: a structural point of view

Y Wu, L Zeng, S Zhao - Biomolecules, 2021 - mdpi.com
Adrenergic receptors are G protein-coupled receptors for epinephrine and norepinephrine.
They are targets of many drugs for various conditions, including treatment of hypertension …

Extended-connectivity fingerprints

D Rogers, M Hahn - Journal of chemical information and modeling, 2010 - ACS Publications
Extended-connectivity fingerprints (ECFPs) are a novel class of topological fingerprints for
molecular characterization. Historically, topological fingerprints were developed for …

Biased Signaling Pathways in β2-Adrenergic Receptor Characterized by 19F-NMR

JJ Liu, R Horst, V Katritch, RC Stevens, K Wüthrich - Science, 2012 - science.org
Extracellular ligand binding to G protein–coupled receptors (GPCRs) modulates G protein
and β-arrestin signaling by changing the conformational states of the cytoplasmic region of …

Structure-based drug screening for G-protein-coupled receptors

BK Shoichet, BK Kobilka - Trends in pharmacological sciences, 2012 - cell.com
G-protein-coupled receptors (GPCRs) represent a large family of signaling proteins that
includes many therapeutic targets; however, progress in identifying new small molecule …

Diazepam-bound GABAA receptor models identify new benzodiazepine binding-site ligands

L Richter, C De Graaf, W Sieghart, Z Varagic… - Nature chemical …, 2012 - nature.com
Benzodiazepines exert their anxiolytic, anticonvulsant, muscle-relaxant and sedative-
hypnotic properties by allosterically enhancing the action of GABA at GABAA receptors via …

Structure-based discovery of β2-adrenergic receptor ligands

P Kolb, DM Rosenbaum, JJ Irwin… - Proceedings of the …, 2009 - National Acad Sciences
Aminergic G protein-coupled receptors (GPCRs) have been a major focus of pharmaceutical
research for many years. Due partly to the lack of reliable receptor structures, drug discovery …

Structure-Based Discovery of Novel Chemotypes for Adenosine A2A Receptor Antagonists

V Katritch, VP Jaakola, JR Lane, J Lin… - Journal of medicinal …, 2010 - ACS Publications
The recent progress in crystallography of G-protein coupled receptors opens an
unprecedented venue for structure-based GPCR drug discovery. To test efficiency of the …

Ligand pose and orientational sampling in molecular docking

RG Coleman, M Carchia, T Sterling, JJ Irwin… - PloS one, 2013 - journals.plos.org
Molecular docking remains an important tool for structure-based screening to find new
ligands and chemical probes. As docking ambitions grow to include new scoring function …

Crystal Structure-Based Virtual Screening for Fragment-like Ligands of the Human Histamine H1 Receptor

C De Graaf, AJ Kooistra, HF Vischer… - Journal of medicinal …, 2011 - ACS Publications
The recent crystal structure determinations of druggable class AG protein-coupled receptors
(GPCRs) have opened up excellent opportunities in structure-based ligand discovery for this …