[HTML][HTML] Past, present, and future perspectives of environmental DNA (eDNA) metabarcoding: A systematic review in methods, monitoring, and applications of global …

KM Ruppert, RJ Kline, MS Rahman - Global Ecology and Conservation, 2019 - Elsevier
Environmental DNA (eDNA) metabarcoding is a novel method of assessing biodiversity
wherein samples are taken from the environment via water, sediment or air from which DNA …

Predicting the fate of eDNA in the environment and implications for studying biodiversity

JB Harrison, JM Sunday… - Proceedings of the …, 2019 - royalsocietypublishing.org
Environmental DNA (eDNA) applications are transforming the standard of characterizing
aquatic biodiversity via the presence, location and abundance of DNA collected from …

Natural vs anthropogenic streams in Europe: History, ecology and implications for restoration, river-rewilding and riverine ecosystem services

AG Brown, L Lespez, DA Sear, JJ Macaire… - Earth-Science …, 2018 - Elsevier
Abstract In Europe and North America the prevailing model of “natural” lowland streams is
incised-meandering channels with silt-clay floodplains, and this is the typical template for …

Ancient plant DNA in lake sediments

L Parducci, KD Bennett, GF Ficetola, IG Alsos… - New …, 2017 - Wiley Online Library
Contents Summary 924 I. Introduction 925 II. Environmental and temporal limits for survival
of aDNA 925 III. Lake sediments 927 IV. Perspective for plant aDNA research 929 V …

Minimizing polymerase biases in metabarcoding

RV Nichols, C Vollmers, LA Newsom… - Molecular ecology …, 2018 - Wiley Online Library
DNA metabarcoding is an increasingly popular method to characterize and quantify
biodiversity in environmental samples. Metabarcoding approaches simultaneously amplify a …

Collapse of the mammoth-steppe in central Yukon as revealed by ancient environmental DNA

TJ Murchie, AJ Monteath, ME Mahony, GS Long… - Nature …, 2021 - nature.com
The temporal and spatial coarseness of megafaunal fossil records complicates attempts to to
disentangle the relative impacts of climate change, ecosystem restructuring, and human …

Plant DNA metabarcoding of lake sediments: How does it represent the contemporary vegetation

IG Alsos, Y Lammers, NG Yoccoz, T Jørgensen… - PloS one, 2018 - journals.plos.org
Metabarcoding of lake sediments have been shown to reveal current and past biodiversity,
but little is known about the degree to which taxa growing in the vegetation are represented …

Methods for the extraction, storage, amplification and sequencing of DNA from environmental samples

G Lear, I Dickie, J Banks, S Boyer, HL Buckley… - New Zealand Journal of …, 2018 - JSTOR
Advances in the sequencing of DNA extracted from media such as soil and water offer huge
opportunities for biodiversity monitoring and assessment, particularly where the collection or …

DNA-based methods in paleolimnology: new opportunities for investigating long-term dynamics of lacustrine biodiversity

I Domaizon, A Winegardner, E Capo, J Gauthier… - Journal of …, 2017 - Springer
The emergence of DNA analyses of lake sediments has opened up many new areas of
inquiry, including the study of taxa that were traditionally not considered in paleolimnology …

Timing and causes of mid-Holocene mammoth extinction on St. Paul Island, Alaska

RW Graham, S Belmecheri, K Choy… - Proceedings of the …, 2016 - National Acad Sciences
Relict woolly mammoth (Mammuthus primigenius) populations survived on several small
Beringian islands for thousands of years after mainland populations went extinct. Here we …