Research advances and prospects of orphan genes in plants
M Jiang, X Li, X Dong, Y Zu, Z Zhan, Z Piao… - Frontiers in Plant …, 2022 - frontiersin.org
Orphan genes (OGs) are defined as genes having no sequence similarity with genes
present in other lineages. OGs have been regarded to play a key role in the development of …
present in other lineages. OGs have been regarded to play a key role in the development of …
Raising orphans from a metadata morass: A researcher's guide to re-use of public'omics data
More than 15 petabases of raw RNAseq data is now accessible through public repositories.
Acquisition of other'omics data types is expanding, though most lack a centralized archival …
Acquisition of other'omics data types is expanding, though most lack a centralized archival …
Enhanced meristem development, tolerance to oxidative stress and hyposensitivity to nitric oxide in the hypermorphic vq10‐H mutant in AtVQ10 gene
B Gayubas, MC Castillo, S Ramos… - Plant, Cell & …, 2023 - Wiley Online Library
Nitric oxide (NO) and reactive oxygen are common factors in multiple plant responses to
stress, and their involvement in hypoxia‐triggered responses is key to ensure growth under …
stress, and their involvement in hypoxia‐triggered responses is key to ensure growth under …
FLOWERING LOCUS T mRNA is synthesized in specialized companion cells in Arabidopsis and Maryland Mammoth tobacco leaf veins
Q Chen, RS Payyavula, L Chen… - Proceedings of the …, 2018 - National Acad Sciences
Flowering is triggered by the transmission of a mobile protein, FLOWERING LOCUS T (FT),
from leaves to the shoot apex. FT originates in the phloem of leaf veins. However, the …
from leaves to the shoot apex. FT originates in the phloem of leaf veins. However, the …
Identification of key genes contributing to amino acid biosynthesis in Torreya grandis using transcriptome and metabolome analysis
H Lou, Y Yang, S Zheng, Z Ma, W Chen, C Yu, L Song… - Food Chemistry, 2022 - Elsevier
Torreya grandis has high economic and nutritional value due to the high nutrients in its
kernels. The kernels of different development stages vary enormously in their amino acids …
kernels. The kernels of different development stages vary enormously in their amino acids …
Senescence-Associated Sugar Transporter1 affects developmental master regulators and controls senescence in Arabidopsis
J Cheng, M Arystanbek Kyzy, A Heide, A Khan… - Plant …, 2024 - academic.oup.com
Sugar transport across membranes is critical for plant development and yield. However, an
analysis of the role of intracellular sugar transporters in senescence is lacking. Here, we …
analysis of the role of intracellular sugar transporters in senescence is lacking. Here, we …
Histone demethylases ELF6 and JMJ13 antagonistically regulate self-fertility in Arabidopsis
C Keyzor, B Mermaz, E Trigazis, SY Jo… - Frontiers in plant …, 2021 - frontiersin.org
The chromatin modification H3K27me3 is involved in almost every developmental stage in
Arabidopsis. Much remains unknown about the dynamic regulation of this histone …
Arabidopsis. Much remains unknown about the dynamic regulation of this histone …
Mitochondrial fostering: the mitochondrial genome may play a role in plant orphan gene evolution
S O'Conner, L Li - Frontiers in plant science, 2020 - frontiersin.org
Plant mitochondrial genomes exhibit unique evolutionary patterns. They have a high
rearrangement but low mutation rate, and a large size. Based on massive mitochondrial …
rearrangement but low mutation rate, and a large size. Based on massive mitochondrial …
Genetic innovations: Transposable element recruitment and de novo formation lead to the birth of orphan genes in the rice genome
Orphan genes are genetic innovations that lack homologs in other lineages. Orphan genes
can rapidly originate and become substantially functional, yet the mechanisms underlying …
can rapidly originate and become substantially functional, yet the mechanisms underlying …
Mining genic resources regulating nitrogen‐use efficiency based on integrative biological analyses and their breeding applications in maize and other crops
J Xing, J Zhang, Y Wang, X Wei, Z Yin… - The Plant …, 2024 - Wiley Online Library
Nitrogen (N) is an essential factor for limiting crop yields, and cultivation of crops with low
nitrogen‐use efficiency (NUE) exhibits increasing environmental and ecological risks …
nitrogen‐use efficiency (NUE) exhibits increasing environmental and ecological risks …