The role and activity of SWI/SNF chromatin remodelers

T Bieluszewski, S Prakash, T Roulé… - Annual Review of Plant …, 2023 - annualreviews.org
SWITCH deficient SUCROSE NONFERMENTING (SWI/SNF) class chromatin remodeling
complexes (CRCs) use the energy derived from ATP hydrolysis to facilitate access of …

Epigenetic mechanisms of longevity and aging

P Sen, PP Shah, R Nativio, SL Berger - Cell, 2016 - cell.com
Aging is an inevitable outcome of life, characterized by progressive decline in tissue and
organ function and increased risk of mortality. Accumulating evidence links aging to genetic …

Epigenetic changes during aging and their reprogramming potential

AE Kane, DA Sinclair - Critical reviews in biochemistry and …, 2019 - Taylor & Francis
The aging process results in significant epigenetic changes at all levels of chromatin and
DNA organization. These include reduced global heterochromatin, nucleosome remodeling …

ATP-dependent chromatin remodeling: genetics, genomics and mechanisms

DC Hargreaves, GR Crabtree - Cell research, 2011 - nature.com
Macromolecular assemblies that regulate chromatin structure using the energy of ATP
hydrolysis have critical roles in development, cancer, and stem cell biology. The ATPases of …

Methylation of histone H3 Lys 4 in coding regions of active genes

BE Bernstein, EL Humphrey, RL Erlich… - Proceedings of the …, 2002 - National Acad Sciences
Posttranslational modifications of histone tails regulate chromatin structure and transcription.
Here we present global analyses of histone acetylation and histone H3 Lys 4 methylation …

Chromatin and transcription in yeast

OJ Rando, F Winston - Genetics, 2012 - academic.oup.com
Understanding the mechanisms by which chromatin structure controls eukaryotic
transcription has been an intense area of investigation for the past 25 years. Many of the key …

Chromatin remodelling: the industrial revolution of DNA around histones

A Saha, J Wittmeyer, BR Cairns - Nature reviews Molecular cell biology, 2006 - nature.com
Chromatin remodellers are specialized multi-protein machines that enable access to
nucleosomal DNA by altering the structure, composition and positioning of nucleosomes. All …

Genome-wide localization of the nuclear transport machinery couples transcriptional status and nuclear organization

JM Casolari, CR Brown, S Komili, J West… - Cell, 2004 - cell.com
The association of genes with the nuclear pore complex (NPC) and nuclear transport factors
has been implicated in transcriptional regulation. We therefore examined the association of …

[HTML][HTML] A library of yeast transcription factor motifs reveals a widespread function for Rsc3 in targeting nucleosome exclusion at promoters

G Badis, ET Chan, H van Bakel, L Pena-Castillo, D Tillo… - Molecular cell, 2008 - cell.com
The sequence specificity of DNA-binding proteins is the primary mechanism by which the
cell recognizes genomic features. Here, we describe systematic determination of yeast …

High-resolution DNA-binding specificity analysis of yeast transcription factors

C Zhu, KJRP Byers, RP McCord, Z Shi… - Genome …, 2009 - genome.cshlp.org
Transcription factors (TFs) regulate the expression of genes through sequence-specific
interactions with DNA-binding sites. However, despite recent progress in identifying in vivo …