Stochastic community assembly: does it matter in microbial ecology?

J Zhou, D Ning - Microbiology and molecular biology reviews, 2017 - Am Soc Microbiol
Understanding the mechanisms controlling community diversity, functions, succession, and
biogeography is a central, but poorly understood, topic in ecology, particularly in microbial …

Phytoplankton dynamics in a changing Arctic Ocean

M Ardyna, KR Arrigo - Nature Climate Change, 2020 - nature.com
Abstract Changes in the Arctic atmosphere, cryosphere and Ocean are drastically altering
the dynamics of phytoplankton, the base of marine ecosystems. This Review addresses four …

[图书][B] Environmental DNA: For biodiversity research and monitoring

P Taberlet, A Bonin, L Zinger, E Coissac - 2018 - books.google.com
Environmental DNA (eDNA) refers to DNA that can be extracted from environmental
samples (such as soil, water, feces, or air) without the prior isolation of any target organism …

Biogeographic patterns of abundant and rare bacterioplankton in three subtropical bays resulting from selective and neutral processes

Y Mo, W Zhang, J Yang, Y Lin, Z Yu, S Lin - The ISME journal, 2018 - academic.oup.com
Unraveling the relative importance of ecological processes regulating microbial community
structure is a central goal in microbial ecology. Here, we used high-throughput sequencing …

Parasites dominate hyperdiverse soil protist communities in Neotropical rainforests

F Mahé, C de Vargas, D Bass, L Czech… - Nature ecology & …, 2017 - nature.com
High animal and plant richness in tropical rainforest communities has long intrigued
naturalists. It is unknown if similar hyperdiversity patterns are reflected at the microbial scale …

Perspectives from ten years of protist studies by high‐throughput metabarcoding

L Santoferrara, F Burki, S Filker… - Journal of Eukaryotic …, 2020 - Wiley Online Library
During the last decade, high‐throughput metabarcoding became routine for analyzing
protistan diversity and distributions in nature. Amid a multitude of exciting findings, scientists …

Microbial community structure and associations during a marine dinoflagellate bloom

J Zhou, ML Richlen, TR Sehein, DM Kulis… - Frontiers in …, 2018 - frontiersin.org
Interactions between microorganisms and algae during bloom events significantly impacts
their physiology, alters ambient chemistry, and shapes ecosystem diversity. The potential …

The polar night shift: seasonal dynamics and drivers of Arctic Ocean microbiomes revealed by autonomous sampling

M Wietz, C Bienhold, K Metfies… - ISME …, 2021 - academic.oup.com
Abstract The Arctic Ocean features extreme seasonal differences in daylight, temperature,
ice cover, and mixed layer depth. However, the diversity and ecology of microbes across …

The importance of neutral and niche processes for bacterial community assembly differs between habitat generalists and specialists

J Liao, X Cao, L Zhao, J Wang, Z Gao… - FEMS Microbiology …, 2016 - academic.oup.com
The mechanisms of community assembly are a central focus in the field of microbial ecology.
However, to what extent these mechanisms differ in importance by traits of groups is poorly …

Particle‐association lifestyle is a phylogenetically conserved trait in bathypelagic prokaryotes

G Salazar, FM Cornejo‐Castillo, E Borrull… - Molecular …, 2015 - Wiley Online Library
The free‐living (FL) and particle‐attached (PA) marine microbial communities have
repeatedly been proved to differ in their diversity and composition in the photic ocean and …