Imaging-based screens of pool-synthesized cell libraries
Mapping a genetic perturbation to a change in phenotype is at the core of biological
research. Advances in microscopy have transformed these studies, but they have largely …
research. Advances in microscopy have transformed these studies, but they have largely …
High‐throughput, microscope‐based sorting to dissect cellular heterogeneity
N Hasle, A Cooke, S Srivatsan, H Huang… - Molecular Systems …, 2020 - embopress.org
Microscopy is a powerful tool for characterizing complex cellular phenotypes, but linking
these phenotypes to genotype or RNA expression at scale remains challenging. Here, we …
these phenotypes to genotype or RNA expression at scale remains challenging. Here, we …
Versatile phenotype-activated cell sorting
Unraveling the genetic and epigenetic determinants of phenotypes is critical for
understanding and re-engineering biology and would benefit from improved methods to …
understanding and re-engineering biology and would benefit from improved methods to …
Human iPSC-derived neurons and lymphoblastoid cells for personalized medicine research in neuropsychiatric disorders
D Gurwitz - Dialogues in clinical neuroscience, 2016 - Taylor & Francis
The development and clinical implementation of personalized medicine crucially depends
on the availability of high-quality human biosamples; animal models, although capable of …
on the availability of high-quality human biosamples; animal models, although capable of …
Machine learning predictions of T cell antigen specificity from intracellular calcium dynamics
S This, S Costantino, HJ Melichar - Science Advances, 2024 - science.org
Adoptive T cell therapies rely on the production of T cells with an antigen receptor that
directs their specificity toward tumor-specific antigens. Methods for identifying relevant T cell …
directs their specificity toward tumor-specific antigens. Methods for identifying relevant T cell …
Migration speed of captured breast cancer subpopulations correlates with metastatic fitness
N Desjardins-Lecavalier, MG Annis… - Journal of Cell …, 2023 - journals.biologists.com
The genetic alterations contributing to migration proficiency, a phenotypic hallmark of
metastatic cells required for colonizing distant organs, remain poorly defined. Here, we used …
metastatic cells required for colonizing distant organs, remain poorly defined. Here, we used …
Optical Cell Tagging for Spatially Resolved Single‐Cell RNA Sequencing
Q Tang, L Liu, Y Guo, X Zhang, S Zhang… - Angewandte …, 2022 - Wiley Online Library
Single‐cell RNA sequencing (scRNA‐seq) has emerged as a powerful tool for profiling gene
expression of distinct cell populations at the single‐cell level. However, the information of …
expression of distinct cell populations at the single‐cell level. However, the information of …
Transcriptome profiling of mouse brains with qkI-deficient oligodendrocytes reveals major alternative splicing defects including self-splicing
The qkI gene encodes a family of RNA binding proteins alternatively spliced at its 3′ end,
giving rise to three major spliced isoforms: QKI-5, QKI-6 and QKI-7. Their expression is …
giving rise to three major spliced isoforms: QKI-5, QKI-6 and QKI-7. Their expression is …
Advances in Single-Cell Techniques for Linking Phenotypes to Genotypes
HC Chen, Y Ma, J Cheng… - Cancer heterogeneity and …, 2024 - pmc.ncbi.nlm.nih.gov
Single-cell analysis has become an essential tool in modern biological research, providing
unprecedented insights into cellular behavior and heterogeneity. By examining individual …
unprecedented insights into cellular behavior and heterogeneity. By examining individual …
A potent nuclear export mechanism imposes USP16 cytoplasmic localization during interphase
N Sen Nkwe, S Daou, M Uriarte… - Journal of cell …, 2020 - journals.biologists.com
ABSTRACT USP16 (also known as UBP-M) has emerged as a histone H2AK119
deubiquitylase (DUB) implicated in the regulation of chromatin-associated processes and …
deubiquitylase (DUB) implicated in the regulation of chromatin-associated processes and …