Photodissociation mass spectrometry: new tools for characterization of biological molecules
JS Brodbelt - Chemical Society Reviews, 2014 - pubs.rsc.org
Photodissociation mass spectrometry combines the ability to activate and fragment ions
using photons with the sensitive detection of the resulting product ions by mass …
using photons with the sensitive detection of the resulting product ions by mass …
Protein amino-termini and how to identify them
A Bogaert, K Gevaert - Expert Review of Proteomics, 2020 - Taylor & Francis
Introduction The N-terminus of a protein can encode several protein features, including its
half-live and its localization. As the proteomics field remains dominated by bottom-up …
half-live and its localization. As the proteomics field remains dominated by bottom-up …
Charge transfer dissociation (CTD) mass spectrometry of peptide cations using kiloelectronvolt helium cations
WD Hoffmann, GP Jackson - Journal of the American Society for …, 2014 - ACS Publications
A kiloelectronvolt beam of helium ions is used to ionize and fragment precursor peptide ions
starting in the 1+ charge state. The electron affinity of helium cations (24.6 eV) exceeds the …
starting in the 1+ charge state. The electron affinity of helium cations (24.6 eV) exceeds the …
Distinguishing aspartic and isoaspartic acids in peptides by several mass spectrometric fragmentation methods
N DeGraan-Weber, J Zhang… - Journal of The American …, 2016 - ACS Publications
Six ion fragmentation techniques that can distinguish aspartic acid from its isomer,
isoaspartic acid, were compared. MALDI post-source decay (PSD), MALDI 157 nm …
isoaspartic acid, were compared. MALDI post-source decay (PSD), MALDI 157 nm …
An improved stable isotope N-terminal labeling approach with light/heavy TMPP to automate proteogenomics data validation: dN-TOP
D Bertaccini, S Vaca, C Carapito… - Journal of proteome …, 2013 - ACS Publications
In silico gene prediction has proven to be prone to errors, especially regarding precise
localization of start codons that spread in subsequent biological studies. Therefore, the high …
localization of start codons that spread in subsequent biological studies. Therefore, the high …
Diagnostic utility of N-terminal TMPP labels for unambiguous identification of clipped sites in therapeutic proteins
HP Gunawardena, MM Jayatilake, JD Brelsford… - Scientific Reports, 2023 - nature.com
Protein therapeutics are susceptible to clipping via enzymatic and nonenzymatic
mechanisms that create neo-N-termini. Typically, neo-N-termini are identified by chemical …
mechanisms that create neo-N-termini. Typically, neo-N-termini are identified by chemical …
Ultraviolet photodissociation of protonated, fixed charge, and charge-reduced peptides
DD Holden, JM Pruet, JS Brodbelt - International Journal of Mass …, 2015 - Elsevier
The fragmentation behavior of three peptides (RGAFSTFGAS, GAFSTFGASR, and
GAFSTFGASS) was evaluated by collisional activated dissociation (CAD), higher energy …
GAFSTFGASS) was evaluated by collisional activated dissociation (CAD), higher energy …
Ultraviolet photodissociation induced by light‐emitting diodes in a planar ion trap
The first application of light‐emitting diodes (LEDs) for ultraviolet photodissociation (UVPD)
mass spectrometry is reported. LEDs provide a compact, low cost light source and have …
mass spectrometry is reported. LEDs provide a compact, low cost light source and have …
A novel triethylphosphonium charge tag on peptides: synthesis, derivatization, and fragmentation
N DeGraan-Weber, SA Ward… - Journal of The American …, 2017 - ACS Publications
Charge tagging is a peptide derivatization process that commonly localizes a positive
charge on the N-terminus. Upon low energy activation (eg, collision-induced dissociation or …
charge on the N-terminus. Upon low energy activation (eg, collision-induced dissociation or …
Identification of N‐terminal protein processing sites by chemical labeling mass spectrometry
Rationale Proteins undergo post‐translational modifications and proteolytic processing that
can affect their biological function. Processing often involves the loss of single residues …
can affect their biological function. Processing often involves the loss of single residues …