Assessing genomic diversity and signatures of selection in Jiaxian Red cattle using whole-genome sequencing data
X Xia, S Zhang, H Zhang, Z Zhang, N Chen, Z Li, H Sun… - BMC genomics, 2021 - Springer
Background Native cattle breeds are an important source of genetic variation because they
might carry alleles that enable them to adapt to local environment and tough feeding …
might carry alleles that enable them to adapt to local environment and tough feeding …
Dual domestications and origin of traits in grapevine evolution
Y Dong, S Duan, Q Xia, Z Liang, X Dong, K Margaryan… - Science, 2023 - science.org
We elucidate grapevine evolution and domestication histories with 3525 cultivated and wild
accessions worldwide. In the Pleistocene, harsh climate drove the separation of wild grape …
accessions worldwide. In the Pleistocene, harsh climate drove the separation of wild grape …
A super pan-genomic landscape of rice
L Shang, X Li, H He, Q Yuan, Y Song, Z Wei, H Lin… - Cell Research, 2022 - nature.com
Pan-genomes from large natural populations can capture genetic diversity and reveal
genomic complexity. Using de novo long-read assembly, we generated a graph-based …
genomic complexity. Using de novo long-read assembly, we generated a graph-based …
Improved pea reference genome and pan-genome highlight genomic features and evolutionary characteristics
Complete and accurate reference genomes and annotations provide fundamental resources
for functional genomics and crop breeding. Here we report a de novo assembly and …
for functional genomics and crop breeding. Here we report a de novo assembly and …
A chickpea genetic variation map based on the sequencing of 3,366 genomes
RK Varshney, M Roorkiwal, S Sun, P Bajaj… - Nature, 2021 - nature.com
Zero hunger and good health could be realized by 2030 through effective conservation,
characterization and utilization of germplasm resources. So far, few chickpea (Cicer …
characterization and utilization of germplasm resources. So far, few chickpea (Cicer …
Population genomic analysis of Aegilops tauschii identifies targets for bread wheat improvement
Aegilops tauschii, the diploid wild progenitor of the D subgenome of bread wheat, is a
reservoir of genetic diversity for improving bread wheat performance and environmental …
reservoir of genetic diversity for improving bread wheat performance and environmental …
Two divergent haplotypes from a highly heterozygous lychee genome suggest independent domestication events for early and late-maturing cultivars
G Hu, J Feng, X Xiang, J Wang, J Salojärvi, C Liu… - Nature …, 2022 - nature.com
Lychee is an exotic tropical fruit with a distinct flavor. The genome of cultivar 'Feizixiao'was
assembled into 15 pseudochromosomes, totaling~ 470 Mb. High heterozygosity (2.27%) …
assembled into 15 pseudochromosomes, totaling~ 470 Mb. High heterozygosity (2.27%) …
Large-scale whole-genome resequencing unravels the domestication history of Cannabis sativa
Cannabis sativa has long been an important source of fiber extracted from hemp and both
medicinal and recreational drugs based on cannabinoid compounds. Here, we investigated …
medicinal and recreational drugs based on cannabinoid compounds. Here, we investigated …
Pangenome analysis reveals genomic variations associated with domestication traits in broomcorn millet
Broomcorn millet (Panicum miliaceum L.) is an orphan crop with the potential to improve
cereal production and quality, and ensure food security. Here we present the genetic …
cereal production and quality, and ensure food security. Here we present the genetic …
Multiple domestications of Asian rice
CY Jing, FM Zhang, XH Wang, MX Wang, L Zhou, Z Cai… - Nature plants, 2023 - nature.com
The origin of domesticated Asian rice (Oryza sativa L.) has been controversial for more than
half a century. The debates have focused on two leading hypotheses: a single domestication …
half a century. The debates have focused on two leading hypotheses: a single domestication …