A comparative review of dimension reduction methods in approximate Bayesian computation
Supplement to “A Comparative Review of Dimension Reduction Methods in Approximate
Bayesian Computation”. The supplement contains for each of the three examples a …
Bayesian Computation”. The supplement contains for each of the three examples a …
Model selection in systems and synthetic biology
Developing mechanistic models has become an integral aspect of systems biology, as has
the need to differentiate between alternative models. Parameterizing mathematical models …
the need to differentiate between alternative models. Parameterizing mathematical models …
Reliable ABC model choice via random forests
Abstract Motivation: Approximate Bayesian computation (ABC) methods provide an
elaborate approach to Bayesian inference on complex models, including model choice. Both …
elaborate approach to Bayesian inference on complex models, including model choice. Both …
Constructing summary statistics for approximate Bayesian computation: semi-automatic approximate Bayesian computation
P Fearnhead, D Prangle - … of the Royal Statistical Society Series …, 2012 - academic.oup.com
Many modern statistical applications involve inference for complex stochastic models, where
it is easy to simulate from the models, but impossible to calculate likelihoods. Approximate …
it is easy to simulate from the models, but impossible to calculate likelihoods. Approximate …
Quantification of subclonal selection in cancer from bulk sequencing data
Subclonal architectures are prevalent across cancer types. However, the temporal
evolutionary dynamics that produce tumor subclones remain unknown. Here we measure …
evolutionary dynamics that produce tumor subclones remain unknown. Here we measure …
A framework for parameter estimation and model selection from experimental data in systems biology using approximate Bayesian computation
As modeling becomes a more widespread practice in the life sciences and biomedical
sciences, researchers need reliable tools to calibrate models against ever more complex …
sciences, researchers need reliable tools to calibrate models against ever more complex …
Approximate Bayesian computation (ABC) gives exact results under the assumption of model error
RD Wilkinson - Statistical applications in genetics and molecular …, 2013 - degruyter.com
Approximate Bayesian computation (ABC) or likelihood-free inference algorithms are used
to find approximations to posterior distributions without making explicit use of the likelihood …
to find approximations to posterior distributions without making explicit use of the likelihood …
[HTML][HTML] Approximate Bayesian Computation for infectious disease modelling
A Minter, R Retkute - Epidemics, 2019 - Elsevier
Abstract Approximate Bayesian Computation (ABC) techniques are a suite of model fitting
methods which can be implemented without a using likelihood function. In order to use ABC …
methods which can be implemented without a using likelihood function. In order to use ABC …
On optimality of kernels for approximate Bayesian computation using sequential Monte Carlo
Approximate Bayesian computation (ABC) has gained popularity over the past few years for
the analysis of complex models arising in population genetics, epidemiology and system …
the analysis of complex models arising in population genetics, epidemiology and system …
Neural Methods for Amortized Inference
A Zammit-Mangion, M Sainsbury-Dale… - Annual Review of …, 2024 - annualreviews.org
Simulation-based methods for statistical inference have evolved dramatically over the past
50 years, keeping pace with technological advancements. The field is undergoing a new …
50 years, keeping pace with technological advancements. The field is undergoing a new …