[HTML][HTML] A comprehensive survey of the mutagenic impact of common cancer cytotoxics
B Szikriszt, Á Póti, O Pipek, M Krzystanek, N Kanu… - Genome biology, 2016 - Springer
Background Genomic mutations caused by cytotoxic agents used in cancer chemotherapy
may cause secondary malignancies as well as contribute to the evolution of treatment …
may cause secondary malignancies as well as contribute to the evolution of treatment …
Emerging systems biology approaches in nanotoxicology: Towards a mechanism-based understanding of nanomaterial hazard and risk
Engineered nanomaterials are being developed for a variety of technological applications.
However, the increasing use of nanomaterials in society has led to concerns about their …
However, the increasing use of nanomaterials in society has led to concerns about their …
Genome-scale mutational signatures of aflatoxin in cells, mice, and human tumors
MN Huang, W Yu, WW Teoh, M Ardin… - Genome …, 2017 - genome.cshlp.org
Aflatoxin B1 (AFB1) is a mutagen and IARC (International Agency for Research on Cancer)
Group 1 carcinogen that causes hepatocellular carcinoma (HCC). Here, we present the first …
Group 1 carcinogen that causes hepatocellular carcinoma (HCC). Here, we present the first …
A workflow to study mechanistic indicators for driver gene prediction with Moonlight
M Nourbakhsh, A Saksager, N Tom… - Briefings in …, 2023 - academic.oup.com
Prediction of driver genes (tumor suppressors and oncogenes) is an essential step in
understanding cancer development and discovering potential novel treatments. We recently …
understanding cancer development and discovering potential novel treatments. We recently …
[HTML][HTML] Base changes in tumour DNA have the power to reveal the causes and evolution of cancer
M Hollstein, LB Alexandrov, CP Wild, M Ardin, J Zavadil - Oncogene, 2017 - nature.com
Next-generation sequencing (NGS) technology has demonstrated that the cancer genomes
are peppered with mutations. Although most somatic tumour mutations are unlikely to have …
are peppered with mutations. Although most somatic tumour mutations are unlikely to have …
Quantification and mapping of alkylation in the human genome reveal single nucleotide resolution precursors of mutational signatures
Y Jiang, C Mingard, SM Huber, V Takhaveev… - ACS Central …, 2023 - ACS Publications
Chemical modifications to DNA bases, including DNA adducts arising from reactions with
electrophilic chemicals, are well-known to impact cell growth, miscode during replication …
electrophilic chemicals, are well-known to impact cell growth, miscode during replication …
Environmental epitranscriptomics
A Cayir, HM Byun, TM Barrow - Environmental Research, 2020 - Elsevier
Chemical modifications of RNA molecules have gained increasing attention since evidence
emerged for their substantive roles in a range of biological processes, such as the stability …
emerged for their substantive roles in a range of biological processes, such as the stability …
Immortalization of normal human mammary epithelial cells in two steps by direct targeting of senescence barriers does not require gross genomic alterations
Telomerase reactivation and immortalization are critical for human carcinoma progression.
However, little is known about the mechanisms controlling this crucial step, due in part to the …
However, little is known about the mechanisms controlling this crucial step, due in part to the …
[HTML][HTML] TAF1, associated with intellectual disability in humans, is essential for embryogenesis and regulates neurodevelopmental processes in zebrafish
S Gudmundsson, M Wilbe, B Filipek-Górniok… - Scientific Reports, 2019 - nature.com
The TATA-box binding protein associated factor 1 (TAF1) protein is a key unit of the
transcription factor II D complex that serves a vital function during transcription initiation …
transcription factor II D complex that serves a vital function during transcription initiation …
Experimental and pan-cancer genome analyses reveal widespread contribution of acrylamide exposure to carcinogenesis in humans
M Zhivagui, AWT Ng, M Ardin, MI Churchwell… - Genome …, 2019 - genome.cshlp.org
Humans are frequently exposed to acrylamide, a probable human carcinogen found in
commonplace sources such as most heated starchy foods or tobacco smoke. Prior evidence …
commonplace sources such as most heated starchy foods or tobacco smoke. Prior evidence …