[HTML][HTML] Alternative splicing and protein diversity: plants versus animals
S Chaudhary, W Khokhar, I Jabre, ASN Reddy… - Frontiers in plant …, 2019 - frontiersin.org
Plants, unlike animals, exhibit a very high degree of plasticity in their growth and
development and employ diverse strategies to cope with the variations during diurnal cycles …
development and employ diverse strategies to cope with the variations during diurnal cycles …
Alternative splicing in plants: Current knowledge and future directions for assessing the biological relevance of splice variants
RS Tognacca, FS Rodríguez, FE Aballay… - Journal of …, 2023 - academic.oup.com
Alternative splicing is an important regulatory process that produces multiple transcripts from
a single gene, significantly modulating the transcriptome and potentially the proteome …
a single gene, significantly modulating the transcriptome and potentially the proteome …
A high quality Arabidopsis transcriptome for accurate transcript-level analysis of alternative splicing
R Zhang, CPG Calixto, Y Marquez… - Nucleic acids …, 2017 - academic.oup.com
Alternative splicing generates multiple transcript and protein isoforms from the same gene
and thus is important in gene expression regulation. To date, RNA-sequencing (RNA-seq) is …
and thus is important in gene expression regulation. To date, RNA-sequencing (RNA-seq) is …
Transcriptome reprogramming, epigenetic modifications and alternative splicing orchestrate the tomato root response to the beneficial fungus Trichoderma harzianum
M De Palma, M Salzano, C Villano… - Horticulture …, 2019 - academic.oup.com
Beneficial interactions of rhizosphere microorganisms are widely exploited for plant
biofertilization and mitigation of biotic and abiotic constraints. To provide new insights into …
biofertilization and mitigation of biotic and abiotic constraints. To provide new insights into …
[HTML][HTML] Alternative splicing as a regulator of early plant development
D Szakonyi, P Duque - Frontiers in plant science, 2018 - frontiersin.org
Most plant genes are interrupted by introns and the corresponding transcripts need to
undergo pre-mRNA splicing to remove these intervening sequences. Alternative splicing …
undergo pre-mRNA splicing to remove these intervening sequences. Alternative splicing …
Detecting alternatively spliced transcript isoforms from single‐molecule long‐read sequences without a reference genome
Alternative splicing (AS) is a major source of transcript and proteome diversity, but
examining AS in species without well‐annotated reference genomes remains difficult …
examining AS in species without well‐annotated reference genomes remains difficult …
Does co-transcriptional regulation of alternative splicing mediate plant stress responses?
Plants display exquisite control over gene expression to elicit appropriate responses under
normal and stress conditions. Alternative splicing (AS) of pre-mRNAs, a process that …
normal and stress conditions. Alternative splicing (AS) of pre-mRNAs, a process that …
BaRTv2: a highly resolved barley reference transcriptome for accurate transcript‐specific RNA‐seq quantification
Accurate characterisation of splice junctions (SJs) as well as transcription start and end sites
in reference transcriptomes allows precise quantification of transcripts from RNA‐seq data …
in reference transcriptomes allows precise quantification of transcripts from RNA‐seq data …
Large-scale analysis of the cassava transcriptome reveals the impact of cold stress on alternative splicing
S Li, X Yu, Z Cheng, C Zeng, W Li… - Journal of …, 2020 - academic.oup.com
Alternative splicing is an essential post-transcriptional regulatory mechanism that can impact
mRNA stability and protein diversity of eukaryotic genomes. Although numerous forms of …
mRNA stability and protein diversity of eukaryotic genomes. Although numerous forms of …
[HTML][HTML] A comprehensive analysis of alternative splicing in paleopolyploid maize
Identifying and characterizing alternative splicing (AS) enables our understanding of the
biological role of transcript isoform diversity. This study describes the use of publicly …
biological role of transcript isoform diversity. This study describes the use of publicly …