Use of proteomics and peptidomics methods in food bioactive peptide science and engineering

J Carrasco-Castilla, AJ Hernández-Álvarez… - Food Engineering …, 2012 - Springer
Proteomic and peptidomic studies are emerging as an important part of the holistic approach
to food science and technology and have been recently applied in the study and production …

Automated comparative protein structure modeling with SWISS‐MODEL and Swiss‐PdbViewer: A historical perspective

N Guex, MC Peitsch, T Schwede - Electrophoresis, 2009 - Wiley Online Library
SWISS‐MODEL pioneered the field of automated modeling as the first protein modeling
service on the Internet. In combination with the visualization tool Swiss‐PdbViewer, the …

ProSA-web: interactive web service for the recognition of errors in three-dimensional structures of proteins

M Wiederstein, MJ Sippl - Nucleic acids research, 2007 - academic.oup.com
A major problem in structural biology is the recognition of errors in experimental and
theoretical models of protein structures. The ProSA program (Protein Structure Analysis) is …

[HTML][HTML] Bio2RDF: towards a mashup to build bioinformatics knowledge systems

F Belleau, MA Nolin, N Tourigny, P Rigault… - Journal of biomedical …, 2008 - Elsevier
Presently, there are numerous bioinformatics databases available on different websites.
Although RDF was proposed as a standard format for the web, these databases are still …

DOORS to the semantic web and grid with a PORTAL for biomedical computing

C Taswell - IEEE Transactions on Information Technology in …, 2008 - ieeexplore.ieee.org
The semantic web remains in the early stages of development. It has not yet achieved the
goals envisioned by its founders as a pervasive web of distributed knowledge and …

Automated server predictions in CASP7

JND Battey, J Kopp, L Bordoli, RJ Read… - Proteins: Structure …, 2007 - Wiley Online Library
With each round of CASP (Critical Assessment of Techniques for Protein Structure
Prediction), automated prediction servers have played an increasingly important role. Today …

Recognition of Errors in the Refinement and Validation of Three‐Dimensional Structures of AC1 Proteins of Begomovirus Strains by Using ProSA‐Web

R Prajapat, A Marwal, RK Gaur - Journal of Viruses, 2014 - Wiley Online Library
The structural model of begomovirus AC1 protein is useful for understanding biological
function at molecular level and docking study. For this study we have used the ProSA …

The Online Bioinformatics Resources Collection at the University of Pittsburgh Health Sciences Library System—a one-stop gateway to online bioinformatics …

YB Chen, A Chattopadhyay, P Bergen… - Nucleic acids …, 2007 - academic.oup.com
To bridge the gap between the rising information needs of biological and medical
researchers and the rapidly growing number of online bioinformatics resources, we have …

Current progress in network research: toward reference networks for key model organisms

BS Srinivasan, NH Shah, JA Flannick… - Briefings in …, 2007 - academic.oup.com
The collection of multiple genome-scale datasets is now routine, and the frontier of research
in systems biology has shifted accordingly. Rather than clustering a single dataset to …

[图书][B] Protein structure modeling

T Schwede, A Sali, N Eswar, MC Peitsch - 2008 - books.google.com
Knowledge of the three-dimensional (3D) structures of proteins provides invaluable insights
into the molecular basis of their functions. Furthermore, the design of experiments aimed at …