Use of metatranscriptomics in microbiome research
S Bashiardes… - … and biology insights, 2016 - journals.sagepub.com
The human intestinal microbiome is a microbial ecosystem that expresses as many as 100
times more genes than the human host, thereby constituting an important component of the …
times more genes than the human host, thereby constituting an important component of the …
Small RNAs in bacteria and archaea: who they are, what they do, and how they do it
EGH Wagner, P Romby - Advances in genetics, 2015 - Elsevier
Small RNAs are ubiquitously present regulators in all kingdoms of life. Most bacterial and
archaeal small RNAs (sRNAs) act by antisense mechanisms on multiple target mRNAs …
archaeal small RNAs (sRNAs) act by antisense mechanisms on multiple target mRNAs …
Bacterial small RNA regulators: versatile roles and rapidly evolving variations
S Gottesman, G Storz - Cold Spring Harbor perspectives …, 2011 - cshperspectives.cshlp.org
Small RNA regulators (sRNAs) have been identified in a wide range of bacteria and found to
play critical regulatory roles in many processes. The major families of sRNAs include true …
play critical regulatory roles in many processes. The major families of sRNAs include true …
[HTML][HTML] Regulatory RNAs in bacteria
LS Waters, G Storz - Cell, 2009 - cell.com
Bacteria possess numerous and diverse means of gene regulation using RNA molecules,
including mRNA leaders that affect expression in cis, small RNAs that bind to proteins or …
including mRNA leaders that affect expression in cis, small RNAs that bind to proteins or …
Prokaryotic transcriptomics: a new view on regulation, physiology and pathogenicity
R Sorek, P Cossart - Nature Reviews Genetics, 2010 - nature.com
Transcriptome-wide studies in eukaryotes have been instrumental in the characterization of
fundamental regulatory mechanisms for more than a decade. By contrast, in prokaryotes …
fundamental regulatory mechanisms for more than a decade. By contrast, in prokaryotes …
Bacterial antisense RNAs: how many are there, and what are they doing?
MK Thomason, G Storz - Annual review of genetics, 2010 - annualreviews.org
Antisense RNAs encoded on the DNA strand opposite another gene have the potential to
form extensive base-pairing interactions with the corresponding sense RNA. Unlike other …
form extensive base-pairing interactions with the corresponding sense RNA. Unlike other …
[HTML][HTML] Regulatory RNA in bacterial pathogens
K Papenfort, J Vogel - Cell host & microbe, 2010 - cell.com
Bacteria constitute a large and diverse class of infectious agents, causing devastating
diseases in humans, animals, and plants. Our understanding of gene expression control …
diseases in humans, animals, and plants. Our understanding of gene expression control …
Small RNA-mediated regulation in bacteria: a growing palette of diverse mechanisms
T Dutta, S Srivastava - Gene, 2018 - Elsevier
Small RNAs (sRNAs) in bacteria have evolved with diverse mechanisms to balance their
target gene expression in response to changes in the environment. Accumulating studies on …
target gene expression in response to changes in the environment. Accumulating studies on …
Comparative transcriptomics of pathogenic and non‐pathogenic Listeria species
Listeria monocytogenes is a human, food‐borne pathogen. Genomic comparisons between
L. monocytogenes and Listeria innocua, a closely related non‐pathogenic species, were …
L. monocytogenes and Listeria innocua, a closely related non‐pathogenic species, were …