β-Lactams against the Fortress of the Gram-Positive Staphylococcus aureus Bacterium

JF Fisher, S Mobashery - Chemical reviews, 2020 - ACS Publications
The biological diversity of the unicellular bacteria—whether assessed by shape, food,
metabolism, or ecological niche—surely rivals (if not exceeds) that of the multicellular …

Don't let sleeping dogmas lie: new views of peptidoglycan synthesis and its regulation

H Zhao, V Patel, JD Helmann, T Dörr - Molecular microbiology, 2017 - Wiley Online Library
Bacterial cell wall synthesis is the target for some of our most powerful antibiotics and has
thus been the subject of intense research focus for more than 50 years. Surprisingly, we still …

A CRISPRi screen in E. coli reveals sequence-specific toxicity of dCas9

L Cui, A Vigouroux, F Rousset, H Varet… - Nature …, 2018 - nature.com
High-throughput CRISPR-Cas9 screens have recently emerged as powerful tools to
decipher gene functions and genetic interactions. Here we use a genome-wide library of …

Enabling genetic analysis of diverse bacteria with Mobile-CRISPRi

JM Peters, BM Koo, R Patino, GE Heussler… - Nature …, 2019 - nature.com
The vast majority of bacteria, including human pathogens and microbiome species, lack
genetic tools needed to systematically associate genes with phenotypes. This is the major …

High‐throughput CRISPRi phenotyping identifies new essential genes in Streptococcus pneumoniae

X Liu, C Gallay, M Kjos, A Domenech… - Molecular systems …, 2017 - embopress.org
Genome‐wide screens have discovered a large set of essential genes in the opportunistic
human pathogen Streptococcus pneumoniae. However, the functions of many essential …

Essential gene knockdowns reveal genetic vulnerabilities and antibiotic sensitivities in Acinetobacter baumannii

RD Ward, JS Tran, AB Banta, EE Bacon, WE Rose… - Mbio, 2024 - Am Soc Microbiol
The emergence of multidrug-resistant Gram-negative bacteria underscores the need to
define genetic vulnerabilities that can be therapeutically exploited. The Gram-negative …

An expanded CRISPRi toolbox for tunable control of gene expression in Pseudomonas putida

C Batianis, E Kozaeva, SG Damalas… - Microbial …, 2020 - Wiley Online Library
Owing to its wide metabolic versatility and physiological robustness, together with
amenability to genetic manipulations and high resistance to stressful conditions …

Metabolic engineering of Bacillus subtilis fueled by systems biology: recent advances and future directions

Y Liu, J Li, G Du, J Chen, L Liu - Biotechnology advances, 2017 - Elsevier
By combining advanced omics technology and computational modeling, systems biologists
have identified and inferred thousands of regulatory events and system-wide interactions of …

Engineering of Multiple Modules to Improve Amorphadiene Production in Bacillus subtilis Using CRISPR-Cas9

Y Song, S He, II Abdallah, A Jopkiewicz… - Journal of Agricultural …, 2021 - ACS Publications
Engineering strategies to improve terpenoids' production in Bacillus subtilis mainly focus on
2 C-methyl-d-erythritol-4-phosphate (MEP) pathway overexpression. To systematically …

Metabolic Engineering of Bacillus subtilis Toward Taxadiene Biosynthesis as the First Committed Step for Taxol Production

II Abdallah, H Pramastya, R Van Merkerk… - Frontiers in …, 2019 - frontiersin.org
Terpenoids are natural products known for their medicinal and commercial applications.
Metabolic engineering of microbial hosts for the production of valuable compounds, such as …