Design of folded peptides
J Venkatraman, SC Shankaramma… - Chemical reviews, 2001 - ACS Publications
The construction of complex protein folds relies on the precise conversion of a linear
polypeptide chain into a compact 3-dimensional structure. The interplay of forces that link …
polypeptide chain into a compact 3-dimensional structure. The interplay of forces that link …
Roles of β‐turns in protein folding: From peptide models to protein engineering
AMC Marcelino, LM Gierasch - Biopolymers: Original Research …, 2008 - Wiley Online Library
Reverse turns are a major class of protein secondary structure; they represent sites of chain
reversal and thus sites where the globular character of a protein is created. It has been …
reversal and thus sites where the globular character of a protein is created. It has been …
Structures of glycoprotein Ibα and its complex with von Willebrand factor A1 domain
EG Huizinga, S Tsuji, RAP Romijn, ME Schiphorst… - Science, 2002 - science.org
Transient interactions of platelet-receptor glycoprotein Ibα (GpIbα) and the plasma protein
von Willebrand factor (VWF) reduce platelet velocity at sites of vascular damage and play a …
von Willebrand factor (VWF) reduce platelet velocity at sites of vascular damage and play a …
Photocontrol of the β-hairpin polypeptide structure through an optimized azobenzene-based amino acid analogue
A family of neurodegenerative diseases, including Huntington's disease (HD) and
spinocerebellar ataxias, are associated with an abnormal polyglutamine (polyQ) expansion …
spinocerebellar ataxias, are associated with an abnormal polyglutamine (polyQ) expansion …
Aβ40-Lactam (D23/K28) models a conformation highly favorable for nucleation of amyloid
KL Sciarretta, DJ Gordon, AT Petkova, R Tycko… - Biochemistry, 2005 - ACS Publications
Recent solid-state NMR data () demonstrate that Aβ1-40 adopts a conformation in amyloid
fibrils with two in-register, parallel β-sheets, connected by a bend structure encompassing …
fibrils with two in-register, parallel β-sheets, connected by a bend structure encompassing …
Design of a 20-amino acid, three-stranded β-sheet protein
T Kortemme, M Ramı́rez-Alvarado, L Serrano - Science, 1998 - science.org
A 20-residue protein (named Betanova) forming a monomeric, three-stranded, antiparallel β
sheet was designed using a structural backbone template and an iterative hierarchical …
sheet was designed using a structural backbone template and an iterative hierarchical …
Exploring β-sheet structure and interactions with chemical model systems
JS Nowick - Accounts of chemical research, 2008 - ACS Publications
What I cannot create, I do not understand. Richard P. Feynman β-Sheets consist of
extended polypeptide strands (β-strands) connected by a network of hydrogen bonds and …
extended polypeptide strands (β-strands) connected by a network of hydrogen bonds and …
Molecular dynamics simulations of unfolding and refolding of a β-hairpin fragment of protein G
VS Pande, DS Rokhsar - Proceedings of the National …, 1999 - National Acad Sciences
We have studied the unfolding and refolding pathway of a β-hairpin fragment of protein G by
using molecular dynamics. Although this fragment is small, it possesses several of the …
using molecular dynamics. Although this fragment is small, it possesses several of the …
A breakdown of symmetry in the folding transition state of protein L
DE Kim, C Fisher, D Baker - Journal of molecular biology, 2000 - Elsevier
The 62 residue IgG binding domain of protein L consists of a central α-helix packed on a four-
stranded β-sheet formed by N and C-terminal β-hairpins. The overall topology of the protein …
stranded β-sheet formed by N and C-terminal β-hairpins. The overall topology of the protein …
Understanding the key factors that control the rate of β-hairpin folding
D Du, Y Zhu, CY Huang, F Gai - Proceedings of the …, 2004 - National Acad Sciences
Both turn sequence and interstrand hydrophobic side-chain–side-chain interaction have
been suggested to be important determinants of β-hairpin stability. However, their roles in …
been suggested to be important determinants of β-hairpin stability. However, their roles in …