Prospects and challenges of implementing DNA metabarcoding for high-throughput insect surveillance
Trap-based surveillance strategies are widely used for monitoring of invasive insect species,
aiming to detect newly arrived exotic taxa as well as track the population levels of …
aiming to detect newly arrived exotic taxa as well as track the population levels of …
Mitochondrial DNA as a marker of molecular diversity: a reappraisal
Over the last three decades, mitochondrial DNA has been the most popular marker of
molecular diversity, for a combination of technical ease‐of‐use considerations, and …
molecular diversity, for a combination of technical ease‐of‐use considerations, and …
MitoFinder: Efficient automated large‐scale extraction of mitogenomic data in target enrichment phylogenomics
R Allio, A Schomaker‐Bastos… - Molecular ecology …, 2020 - Wiley Online Library
Thanks to the development of high‐throughput sequencing technologies, target enrichment
sequencing of nuclear ultraconserved DNA elements (UCEs) now allows routine inference …
sequencing of nuclear ultraconserved DNA elements (UCEs) now allows routine inference …
Navigating the seven challenges of taxonomic reference databases in metabarcoding analyses
Assessment of biodiversity using metabarcoding data, such as from bulk or environmental
DNA sampling, is becoming increasingly relevant in ecology, biodiversity sciences and …
DNA sampling, is becoming increasingly relevant in ecology, biodiversity sciences and …
Validation and development of COI metabarcoding primers for freshwater macroinvertebrate bioassessment
V Elbrecht, F Leese - Frontiers in Environmental Science, 2017 - frontiersin.org
A central challenge in the present era of biodiversity loss is to assess and manage human
impacts on freshwater ecosystems. Macroinvertebrates are an important group for such …
impacts on freshwater ecosystems. Macroinvertebrates are an important group for such …
Estimating and mitigating amplification bias in qualitative and quantitative arthropod metabarcoding
Amplicon based metabarcoding promises rapid and cost-efficient analyses of species
composition. However, it is disputed whether abundance estimates can be derived from …
composition. However, it is disputed whether abundance estimates can be derived from …
DNA barcoding Australia's fish species
RD Ward, TS Zemlak, BH Innes… - … Transactions of the …, 2005 - royalsocietypublishing.org
Two hundred and seven species of fish, mostly Australian marine fish, were sequenced
(barcoded) for a 655 bp region of the mitochondrial cytochrome oxidase subunit I gene …
(barcoded) for a 655 bp region of the mitochondrial cytochrome oxidase subunit I gene …
Ten species in one: DNA barcoding reveals cryptic species in the neotropical skipper butterfly Astraptes fulgerator
PDN Hebert, EH Penton, JM Burns… - Proceedings of the …, 2004 - National Acad Sciences
Astraptes fulgerator, first described in 1775, is a common and widely distributed neotropical
skipper butterfly (Lepidoptera: Hesperiidae). We combine 25 years of natural history …
skipper butterfly (Lepidoptera: Hesperiidae). We combine 25 years of natural history …
Identification of birds through DNA barcodes
Short DNA sequences from a standardized region of the genome provide a DNA barcode for
identifying species. Compiling a public library of DNA barcodes linked to named specimens …
identifying species. Compiling a public library of DNA barcodes linked to named specimens …
The incomplete natural history of mitochondria
JWO Ballard, MC Whitlock - Molecular ecology, 2004 - Wiley Online Library
Mitochondrial DNA (mtDNA) has been used to study molecular ecology and
phylogeography for 25 years. Much important information has been gained in this way, but it …
phylogeography for 25 years. Much important information has been gained in this way, but it …