Gene regulatory network models for plant development
ER Alvarez-Buylla, M Benítez, EB Dávila… - Current Opinion in Plant …, 2007 - Elsevier
Accumulated genetic data are stimulating the use of mathematical and computational tools
for studying the concerted action of genes during cell differentiation and morphogenetic …
for studying the concerted action of genes during cell differentiation and morphogenetic …
Controllability of Boolean control networks via the Perron–Frobenius theory
D Laschov, M Margaliot - Automatica, 2012 - Elsevier
Boolean control networks (BCNs) are recently attracting considerable interest as
computational models for genetic and cellular networks. Addressing control-theoretic …
computational models for genetic and cellular networks. Addressing control-theoretic …
[HTML][HTML] Flower development
ER Alvarez-Buylla, M Benítez… - The Arabidopsis Book …, 2010 - ncbi.nlm.nih.gov
Flowers are the most complex structures of plants. Studies of Arabidopsis thaliana, which
has typical eudicot flowers, have been fundamental in advancing the structural and …
has typical eudicot flowers, have been fundamental in advancing the structural and …
[图书][B] Phase transitions
RV Solé - 2011 - books.google.com
Phase transitions--changes between different states of organization in a complex system--
have long helped to explain physics concepts, such as why water freezes into a solid or …
have long helped to explain physics concepts, such as why water freezes into a solid or …
The effective graph reveals redundancy, canalization, and control pathways in biochemical regulation and signaling
The ability to map causal interactions underlying genetic control and cellular signaling has
led to increasingly accurate models of the complex biochemical networks that regulate …
led to increasingly accurate models of the complex biochemical networks that regulate …
Observability of Boolean networks: A graph-theoretic approach
D Laschov, M Margaliot, G Even - Automatica, 2013 - Elsevier
Boolean networks (BNs) are discrete-time dynamical systems with Boolean state-variables
and outputs. BNs are recently attracting considerable interest as computational models for …
and outputs. BNs are recently attracting considerable interest as computational models for …
Leveraging eco-evolutionary models for gene drive risk assessment
Engineered gene drives create potential for both widespread benefits and irreversible harms
to ecosystems. CRISPR-based systems of allelic conversion have rapidly accelerated gene …
to ecosystems. CRISPR-based systems of allelic conversion have rapidly accelerated gene …
A SAT-based algorithm for finding attractors in synchronous Boolean networks
E Dubrova, M Teslenko - IEEE/ACM transactions on …, 2011 - ieeexplore.ieee.org
This paper addresses the problem of finding attractors in synchronous Boolean networks.
The existing Boolean decision diagram-based algorithms have limited capacity due to the …
The existing Boolean decision diagram-based algorithms have limited capacity due to the …
Control of complex networks requires both structure and dynamics
The study of network structure has uncovered signatures of the organization of complex
systems. However, there is also a need to understand how to control them; for example …
systems. However, there is also a need to understand how to control them; for example …
Minimum-time control of Boolean networks
D Laschov, M Margaliot - SIAM Journal on Control and Optimization, 2013 - SIAM
Boolean networks (BNs) are discrete-time dynamical systems with Boolean state variables.
BNs have recently been attracting considerable interest as computational models for …
BNs have recently been attracting considerable interest as computational models for …