The immunological and metabolic landscape in primary and metastatic liver cancer

X Li, P Ramadori, D Pfister, M Seehawer… - Nature Reviews …, 2021 - nature.com
The liver is the sixth most common site of primary cancer in humans, and generally arises in
a background of cirrhosis and inflammation. Moreover, the liver is frequently colonized by …

Liver zonation–revisiting old questions with new technologies

RP Cunningham, N Porat-Shliom - Frontiers in physiology, 2021 - frontiersin.org
Despite the ever-increasing prevalence of non-alcoholic fatty liver disease (NAFLD), the
etiology and pathogenesis remain poorly understood. This is due, in part, to the liver's …

DestVI identifies continuums of cell types in spatial transcriptomics data

R Lopez, B Li, H Keren-Shaul, P Boyeau… - Nature …, 2022 - nature.com
Most spatial transcriptomics technologies are limited by their resolution, with spot sizes
larger than that of a single cell. Although joint analysis with single-cell RNA sequencing can …

The spatiotemporal program of zonal liver regeneration following acute injury

S Ben-Moshe, T Veg, R Manco, S Dan, D Papinutti… - Cell Stem Cell, 2022 - cell.com
The liver carries a remarkable ability to regenerate rapidly after acute zonal damage. Single-
cell approaches are necessary to study this process, given the spatial heterogeneity of liver …

Spatial single-cell mass spectrometry defines zonation of the hepatocyte proteome

FA Rosenberger, M Thielert, MT Strauss, L Schweizer… - Nature …, 2023 - nature.com
Single-cell proteomics by mass spectrometry is emerging as a powerful and unbiased
method for the characterization of biological heterogeneity. So far, it has been limited to …

Interconnections between circadian clocks and metabolism

D Guan, MA Lazar - The Journal of clinical investigation, 2021 - Am Soc Clin Investig
Circadian rhythms evolved through adaptation to daily light/dark changes in the
environment; they are believed to be regulated by the core circadian clock interlocking …

Spatiotemporal metabolic liver zonation and consequences on pathophysiology

T Martini, F Naef, JS Tchorz - Annual Review of Pathology …, 2023 - annualreviews.org
Hepatocytes are the main workers in the hepatic factory, managing metabolism of nutrients
and xenobiotics, production and recycling of proteins, and glucose and lipid homeostasis …

Liver zonation, revisited

J Paris, NC Henderson - Hepatology, 2022 - Wiley Online Library
The concept of hepatocyte functional zonation is well established, with differences in
metabolism and xenobiotic processing determined by multiple factors including oxygen and …

The immune niche of the liver

ML Cheng, D Nakib, CT Perciani… - Clinical …, 2021 - portlandpress.com
The liver is an essential organ that is critical for the removal of toxins, the production of
proteins, and the maintenance of metabolic homeostasis. Behind each liver functional unit …

[HTML][HTML] Single-cell spatial multi-omics and deep learning dissect enhancer-driven gene regulatory networks in liver zonation

C Bravo Gonzalez-Blas, I Matetovici, H Hillen… - Nature Cell …, 2024 - nature.com
In the mammalian liver, hepatocytes exhibit diverse metabolic and functional profiles based
on their location within the liver lobule. However, it is unclear whether this spatial variation …