Genome sequencing and population genomics in non-model organisms
H Ellegren - Trends in ecology & evolution, 2014 - cell.com
High-throughput sequencing technologies are revolutionizing the life sciences. The past 12
months have seen a burst of genome sequences from non-model organisms, in each case …
months have seen a burst of genome sequences from non-model organisms, in each case …
[HTML][HTML] Implementing and testing the multispecies coalescent model: a valuable paradigm for phylogenomics
In recent articles published in Molecular Phylogenetics and Evolution, Mark Springer and
John Gatesy (S&G) present numerous criticisms of recent implementations and testing of the …
John Gatesy (S&G) present numerous criticisms of recent implementations and testing of the …
[HTML][HTML] Species list of the European herpetofauna–2020 update by the Taxonomic Committee of the Societas Europaea Herpetologica
The last species list of the European herpetofauna was published by Speybroeck, Beukema
and Crochet (2010). In the meantime, ongoing research led to numerous taxonomic …
and Crochet (2010). In the meantime, ongoing research led to numerous taxonomic …
ASTRAL: genome-scale coalescent-based species tree estimation
Motivation: Species trees provide insight into basic biology, including the mechanisms of
evolution and how it modifies biomolecular function and structure, biodiversity and co …
evolution and how it modifies biomolecular function and structure, biodiversity and co …
Combining phylogenomic and supermatrix approaches, and a time-calibrated phylogeny for squamate reptiles (lizards and snakes) based on 52 genes and 4162 …
Y Zheng, JJ Wiens - Molecular phylogenetics and evolution, 2016 - Elsevier
Two common approaches for estimating phylogenies in species-rich groups are to:(i)
sample many loci for few species (eg phylogenomic approach), or (ii) sample many species …
sample many loci for few species (eg phylogenomic approach), or (ii) sample many species …
Mitochondrial phylogenomics of Hemiptera reveals adaptive innovations driving the diversification of true bugs
H Li, JM Leavengood Jr… - … of the Royal …, 2017 - royalsocietypublishing.org
Hemiptera, the largest non-holometabolous order of insects, represents approximately 7% of
metazoan diversity. With extraordinary life histories and highly specialized morphological …
metazoan diversity. With extraordinary life histories and highly specialized morphological …
Phylotranscriptomic consolidation of the jawed vertebrate timetree
Phylogenomics is extremely powerful but introduces new challenges as no agreement exists
on 'standards' for data selection, curation and tree inference. We use jawed vertebrates …
on 'standards' for data selection, curation and tree inference. We use jawed vertebrates …
Three crocodilian genomes reveal ancestral patterns of evolution among archosaurs
INTRODUCTION Crocodilians and birds are the two extant clades of archosaurs, a group
that includes the extinct dinosaurs and pterosaurs. Fossils suggest that living crocodilians …
that includes the extinct dinosaurs and pterosaurs. Fossils suggest that living crocodilians …
Common evolutionary origin of acoustic communication in choanate vertebrates
G Jorgewich-Cohen, SW Townsend… - Nature …, 2022 - nature.com
Acoustic communication, broadly distributed along the vertebrate phylogeny, plays a
fundamental role in parental care, mate attraction and various other behaviours. Despite its …
fundamental role in parental care, mate attraction and various other behaviours. Despite its …
The origins of acoustic communication in vertebrates
Z Chen, JJ Wiens - Nature communications, 2020 - nature.com
Acoustic communication is crucial to humans and many other tetrapods, including birds,
frogs, crocodilians, and mammals. However, large-scale patterns in its evolution are largely …
frogs, crocodilians, and mammals. However, large-scale patterns in its evolution are largely …