Plant-polysaccharide-degrading enzymes from basidiomycetes

J Rytioja, K Hildén, J Yuzon, A Hatakka… - Microbiology and …, 2014 - Am Soc Microbiol
Basidiomycete fungi subsist on various types of plant material in diverse environments, from
living and dead trees and forest litter to crops and grasses and to decaying plant matter in …

Fungal bioremediation of soil co-contaminated with petroleum hydrocarbons and toxic metals

Q Li, J Liu, GM Gadd - Applied Microbiology and Biotechnology, 2020 - Springer
Much research has been carried out on the bacterial bioremediation of soil contaminated
with petroleum hydrocarbons and toxic metals but much less is known about the potential of …

Prediction of effector protein structures from fungal phytopathogens enables evolutionary analyses

K Seong, KV Krasileva - Nature Microbiology, 2023 - nature.com
Elucidating the similarity and diversity of pathogen effectors is critical to understand their
evolution across fungal phytopathogens. However, rapid divergence that diminishes …

Notes, outline and divergence times of Basidiomycota

MQ He, RL Zhao, KD Hyde, D Begerow, M Kemler… - Fungal diversity, 2019 - Springer
The Basidiomycota constitutes a major phylum of the kingdom Fungi and is second in
species numbers to the Ascomycota. The present work provides an overview of all validly …

A phylum-level phylogenetic classification of zygomycete fungi based on genome-scale data

JW Spatafora, Y Chang, GL Benny, K Lazarus… - Mycologia, 2016 - Taylor & Francis
Zygomycete fungi were classified as a single phylum, Zygomycota, based on sexual
reproduction by zygospores, frequent asexual reproduction by sporangia, absence of …

Improved prediction of fungal effector proteins from secretomes with EffectorP 2.0

J Sperschneider, PN Dodds… - Molecular plant …, 2018 - Wiley Online Library
Plant‐pathogenic fungi secrete effector proteins to facilitate infection. We describe extensive
improvements to EffectorP, the first machine learning classifier for fungal effector prediction …

Extensive sampling of basidiomycete genomes demonstrates inadequacy of the white-rot/brown-rot paradigm for wood decay fungi

R Riley, AA Salamov, DW Brown… - Proceedings of the …, 2014 - National Acad Sciences
Basidiomycota (basidiomycetes) make up 32% of the described fungi and include most
wood-decaying species, as well as pathogens and mutualistic symbionts. Wood-decaying …

EffectorP: predicting fungal effector proteins from secretomes using machine learning

J Sperschneider, DM Gardiner, PN Dodds… - New …, 2016 - Wiley Online Library
Eukaryotic filamentous plant pathogens secrete effector proteins that modulate the host cell
to facilitate infection. Computational effector candidate identification and subsequent …

[图书][B] Recent advancement in white biotechnology through fungi

AN Yadav, S Singh, S Mishra, A Gupta - 2019 - Springer
White biotechnology, or industrial biotechnology, is drawing much attention as a solution to
produce energy, chemicals and other materials from renewable resources. White …

Diverse Lifestyles and Strategies of Plant Pathogenesis Encoded in the Genomes of Eighteen Dothideomycetes Fungi

RA Ohm, N Feau, B Henrissat, CL Schoch… - PLoS …, 2012 - journals.plos.org
The class Dothideomycetes is one of the largest groups of fungi with a high level of
ecological diversity including many plant pathogens infecting a broad range of hosts. Here …