Evolution of 3D chromatin organization at different scales
RD Acemel, DG Lupiáñez - Current opinion in genetics & development, 2023 - Elsevier
Highlights•Chromatin folding into topologically associated domains (TADs) is pervasive
across animal groups.•TADs are plastic entities composed of genomic strata from different …
across animal groups.•TADs are plastic entities composed of genomic strata from different …
Genome and transcriptome mechanisms driving cephalopod evolution
Cephalopods are known for their large nervous systems, complex behaviors and
morphological innovations. To investigate the genomic underpinnings of these features, we …
morphological innovations. To investigate the genomic underpinnings of these features, we …
Cephalopod-omics: emerging fields and technologies in cephalopod biology
Few animal groups can claim the level of wonder that cephalopods instill in the minds of
researchers and the general public. Much of cephalopod biology, however, remains …
researchers and the general public. Much of cephalopod biology, however, remains …
MicroRNAs are deeply linked to the emergence of the complex octopus brain
Soft-bodied cephalopods such as octopuses are exceptionally intelligent invertebrates with
a highly complex nervous system that evolved independently from vertebrates. Because of …
a highly complex nervous system that evolved independently from vertebrates. Because of …
Pan-evolutionary and regulatory genome architecture delineated by an integrated macro-and microsynteny approach
H Yu, Y Li, W Han, L Bao, F Liu, Y Ma, Z Pu, Q Zeng… - Nature …, 2024 - nature.com
The forthcoming massive genome data generated by the Earth BioGenome Project will open
up a new era of comparative genomics, for which genome synteny analysis provides an …
up a new era of comparative genomics, for which genome synteny analysis provides an …
Lifecycle, culture, and maintenance of the emerging cephalopod models Euprymna berryi and Euprymna morsei
J Jolly, Y Hasegawa, C Sugimoto, L Zhang… - Frontiers in Marine …, 2022 - frontiersin.org
Cephalopod research remains limited by the inability to culture species under laboratory
conditions for multiple generations to provide continuous access to animals at all stages of …
conditions for multiple generations to provide continuous access to animals at all stages of …
Shifting landscapes: the role of 3D genomic organizations in gene regulatory strategies
J Hehmeyer, F Spitz, H Marlow - Current Opinion in Genetics & …, 2023 - Elsevier
3D genome folding enables the physical storage of chromosomes into the compact volume
of a cell's nucleus, allows for the accurate segregation of chromatin to daughter cells, and …
of a cell's nucleus, allows for the accurate segregation of chromatin to daughter cells, and …
Gene modelling and annotation for the Hawaiian bobtail squid, Euprymna scolopes
Coleoid cephalopods possess numerous complex, species-specific morphological and
behavioural adaptations, eg, a uniquely structured nervous system that is the largest among …
behavioural adaptations, eg, a uniquely structured nervous system that is the largest among …
Evolution and function of chromatin domains across the tree of life
MF Szalay, B Majchrzycka, I Jerković… - Nature Structural & …, 2024 - nature.com
The genome of all organisms is spatially organized to function efficiently. The advent of
genome-wide chromatin conformation capture (Hi-C) methods has revolutionized our ability …
genome-wide chromatin conformation capture (Hi-C) methods has revolutionized our ability …
The gold-ringed octopus (Amphioctopus fangsiao) genome and cerebral single-nucleus transcriptomes provide insights into the evolution of karyotype and neural …
Background Coleoid cephalopods have distinctive neural and morphological characteristics
compared to other invertebrates. Early studies reported massive genomic rearrangements …
compared to other invertebrates. Early studies reported massive genomic rearrangements …