[HTML][HTML] Microsatellite markers: what they mean and why they are so useful
Abstract Microsatellites or Single Sequence Repeats (SSRs) are extensively employed in
plant genetics studies, using both low and high throughput genotyping approaches …
plant genetics studies, using both low and high throughput genotyping approaches …
Advances in research on the carrot, an important root vegetable in the Apiaceae family
F Que, XL Hou, GL Wang, ZS Xu, GF Tan… - Horticulture …, 2019 - academic.oup.com
Abstract Carrots (Daucus carota L.), among the most important root vegetables in the
Apiaceae family, are cultivated worldwide. The storage root is widely utilized due to its …
Apiaceae family, are cultivated worldwide. The storage root is widely utilized due to its …
A high-quality carrot genome assembly provides new insights into carotenoid accumulation and asterid genome evolution
We report a high-quality chromosome-scale assembly and analysis of the carrot (Daucus
carota) genome, the first sequenced genome to include a comparative evolutionary analysis …
carota) genome, the first sequenced genome to include a comparative evolutionary analysis …
Using next‐generation sequencing approaches to isolate simple sequence repeat (SSR) loci in the plant sciences
The application of next‐generation sequencing (NGS) technologies for the development of
simple sequence repeat (SSR) or microsatellite loci for genetic research in the botanical …
simple sequence repeat (SSR) or microsatellite loci for genetic research in the botanical …
Mining and development of novel SSR markers using next generation sequencing (NGS) data in plants
S Taheri, T Lee Abdullah, MR Yusop, MM Hanafi… - Molecules, 2018 - mdpi.com
Microsatellites, or simple sequence repeats (SSRs), are one of the most informative and
multi-purpose genetic markers exploited in plant functional genomics. However, the …
multi-purpose genetic markers exploited in plant functional genomics. However, the …
Origin, evolution, breeding, and omics of Apiaceae: a family of vegetables and medicinal plants
XJ Wang, Q Luo, T Li, PH Meng, YT Pu… - Horticulture …, 2022 - academic.oup.com
Many of the world's most important vegetables and medicinal crops, including carrot, celery,
coriander, fennel, and cumin, belong to the Apiaceae family. In this review, we summarize …
coriander, fennel, and cumin, belong to the Apiaceae family. In this review, we summarize …
MOSAIK: a hash-based algorithm for accurate next-generation sequencing short-read mapping
MOSAIK is a stable, sensitive and open-source program for mapping second and third-
generation sequencing reads to a reference genome. Uniquely among current mapping …
generation sequencing reads to a reference genome. Uniquely among current mapping …
Population genomics identifies genetic signatures of carrot domestication and improvement and uncovers the origin of high-carotenoid orange carrots
Here an improved carrot reference genome and resequencing of 630 carrot accessions
were used to investigate carrot domestication and improvement. The study demonstrated …
were used to investigate carrot domestication and improvement. The study demonstrated …
Genetic structure and domestication of carrot (Daucus carota subsp. sativus) (Apiaceae)
M Iorizzo, DA Senalik, SL Ellison… - American Journal of …, 2013 - Wiley Online Library
• Premise of the study: Analyses of genetic structure and phylogenetic relationships
illuminate the origin and domestication of modern crops. Despite being an important …
illuminate the origin and domestication of modern crops. Despite being an important …
De novo assembly and characterization of bark transcriptome using Illumina sequencing and development of EST-SSR markers in rubber tree (Hevea brasiliensis …
D Li, Z Deng, B Qin, X Liu, Z Men - BMC genomics, 2012 - Springer
Background In rubber tree, bark is one of important agricultural and biological organs.
However, the molecular mechanism involved in the bark formation and development in …
However, the molecular mechanism involved in the bark formation and development in …