Genomic selection in dairy cattle: the USDA experience
GR Wiggans, JB Cole, SM Hubbard… - Annual review of …, 2017 - annualreviews.org
Genomic selection has revolutionized dairy cattle breeding. Since 2000, assays have been
developed to genotype large numbers of single-nucleotide polymorphisms (SNPs) at …
developed to genotype large numbers of single-nucleotide polymorphisms (SNPs) at …
The future of parentage analysis: From microsatellites to SNPs and beyond
SP Flanagan, AG Jones - Molecular ecology, 2019 - Wiley Online Library
Parentage analysis is a cornerstone of molecular ecology that has delivered fundamental
insights into behaviour, ecology and evolution. Microsatellite markers have long been the …
insights into behaviour, ecology and evolution. Microsatellite markers have long been the …
Genome-wide association analysis of thirty one production, health, reproduction and body conformation traits in contemporary US Holstein cows
Background Genome-wide association analysis is a powerful tool for annotating phenotypic
effects on the genome and knowledge of genes and chromosomal regions associated with …
effects on the genome and knowledge of genes and chromosomal regions associated with …
Inbreeding and runs of homozygosity before and after genomic selection in North American Holstein cattle
Background While autozygosity as a consequence of selection is well understood, there is
limited information on the ability of different methods to measure true inbreeding. In the …
limited information on the ability of different methods to measure true inbreeding. In the …
[HTML][HTML] Effect of genomic selection on rate of inbreeding and coancestry and effective population size of Holstein and Jersey cattle populations
Genetic diversity in livestock populations is a significant contributor to the sustainability of
animal production. Also, genetic diversity allows animal production to become more …
animal production. Also, genetic diversity allows animal production to become more …
[HTML][HTML] Genetic parameters for predicted methane production and potential for reducing enteric emissions through genomic selection
Mitigation of enteric methane (CH4) emission in ruminants has become an important area of
research because accumulation of CH4 is linked to global warming. Nutritional and …
research because accumulation of CH4 is linked to global warming. Nutritional and …
[HTML][HTML] The genomic evaluation system in the United States: Past, present, future
GR Wiggans, PM VanRaden, TA Cooper - Journal of dairy science, 2011 - Elsevier
Implementation of genomic evaluation has caused profound changes in dairy cattle
breeding. All young bulls bought by major artificial insemination organizations now are …
breeding. All young bulls bought by major artificial insemination organizations now are …
Genomic evaluations with many more genotypes
PM VanRaden, JR O'Connell, GR Wiggans… - Genetics Selection …, 2011 - Springer
Abstract Background Genomic evaluations in Holstein dairy cattle have quickly become
more reliable over the last two years in many countries as more animals have been …
more reliable over the last two years in many countries as more animals have been …
[PDF][PDF] PREGSF90–POSTGSF90: computational tools for the implementation of single-step genomic selection and genome-wide association with ungenotyped …
Single step genomic methodology provides a unified framework to integrate phenotypic,
pedigree and genomic information in prediction of breeding values for all individuals and in …
pedigree and genomic information in prediction of breeding values for all individuals and in …
Genomic characteristics of cattle copy number variations
Background Copy number variation (CNV) represents another important source of genetic
variation complementary to single nucleotide polymorphism (SNP). High-density SNP array …
variation complementary to single nucleotide polymorphism (SNP). High-density SNP array …