The Atlantic salmon genome provides insights into rediploidization
The whole-genome duplication 80 million years ago of the common ancestor of salmonids
(salmonid-specific fourth vertebrate whole-genome duplication, Ss4R) provides unique …
(salmonid-specific fourth vertebrate whole-genome duplication, Ss4R) provides unique …
De novo assembly of the goldfish (Carassius auratus) genome and the evolution of genes after whole-genome duplication
For over a thousand years, the common goldfish (Carassius auratus) was raised throughout
Asia for food and as an ornamental pet. As a very close relative of the common carp …
Asia for food and as an ornamental pet. As a very close relative of the common carp …
Evolutionary driving forces of A‐to‐I editing in metazoans
Y Duan, X Tang, J Lu - Wiley Interdisciplinary Reviews: RNA, 2022 - Wiley Online Library
Abstract Adenosine‐to‐inosine (A‐to‐I) RNA editing is an evolutionarily conserved
mechanism that converts adenosines to inosines in metazoans' transcriptomes. However …
mechanism that converts adenosines to inosines in metazoans' transcriptomes. However …
Phylogenomics of prokaryotic ribosomal proteins
Archaeal and bacterial ribosomes contain more than 50 proteins, including 34 that are
universally conserved in the three domains of cellular life (bacteria, archaea, and …
universally conserved in the three domains of cellular life (bacteria, archaea, and …
Transporter proteins as ecological assets and features of microbial eukaryotic Pangenomes
Here we review two connected themes in evolutionary microbiology:(a) the nature of gene
repertoire variation within species groups (pangenomes) and (b) the concept of metabolite …
repertoire variation within species groups (pangenomes) and (b) the concept of metabolite …
Comparative gene retention analysis in barley, wild emmer, and bread wheat pangenome lines reveals factors affecting gene retention following gene duplication
Background Gene duplication is a prevalent phenomenon and a major driving force
underlying genome evolution. The process leading to the fixation of gene duplicates …
underlying genome evolution. The process leading to the fixation of gene duplicates …
Structural and agonist properties of XCL2, the other member of the C-chemokine subfamily
JC Fox, T Nakayama, RC Tyler, TL Sander, O Yoshie… - Cytokine, 2015 - Elsevier
Known for its unusual metamorphic native state structure, XCL1 has been the focus of most
efforts to elucidate the structural, functional, and physiological properties of chemokines in …
efforts to elucidate the structural, functional, and physiological properties of chemokines in …
Compensatory drift and the evolutionary dynamics of dosage-sensitive duplicate genes
Dosage-balance selection preserves functionally redundant duplicates (paralogs) at the
optimum for their combined expression. Here we present a model of the dynamics of …
optimum for their combined expression. Here we present a model of the dynamics of …
Toward a general model for the evolutionary dynamics of gene duplicates
A Konrad, AI Teufel, JA Grahnen… - Genome biology and …, 2011 - academic.oup.com
Gene duplication is an important process in the functional divergence of genes and
genomes. Several processes have been described that lead to duplicate gene retention …
genomes. Several processes have been described that lead to duplicate gene retention …
The generality of constructive neutral evolution
TDP Brunet, WF Doolittle - Biology & Philosophy, 2018 - Springer
Abstract Constructive Neutral Evolution (CNE) is an evolutionary mechanism that can
explain much molecular inter-dependence and organismal complexity without assuming …
explain much molecular inter-dependence and organismal complexity without assuming …