Oscillation patterns in negative feedback loops
S Pigolotti, S Krishna… - Proceedings of the …, 2007 - National Acad Sciences
Organisms are equipped with regulatory systems that display a variety of dynamical
behavior ranging from simple stable steady states, to switching and multistability, to …
behavior ranging from simple stable steady states, to switching and multistability, to …
A tale of two rhythms: Locked clocks and chaos in biology
The fundamental mechanisms that control and regulate biological organisms exhibit a
surprising level of complexity. Oscillators are perhaps the simplest motifs that produce time …
surprising level of complexity. Oscillators are perhaps the simplest motifs that produce time …
Oscillations and variability in the p53 system
Understanding the dynamics and variability of protein circuitry requires accurate
measurements in living cells as well as theoretical models. To address this, we employed …
measurements in living cells as well as theoretical models. To address this, we employed …
Recurrent initiation: a mechanism for triggering p53 pulses in response to DNA damage
E Batchelor, CS Mock, I Bhan, A Loewer, G Lahav - Molecular cell, 2008 - cell.com
DNA damage initiates a series of p53 pulses. Although much is known about the interactions
surrounding p53, little is known about which interactions contribute to p53's dynamical …
surrounding p53, little is known about which interactions contribute to p53's dynamical …
Cell fate decision mediated by p53 pulses
The tumor suppressor p53 plays a crucial role in cellular response to various stresses.
Recent experiments have shown that p53 level exhibits a series of pulses after DNA …
Recent experiments have shown that p53 level exhibits a series of pulses after DNA …
Enhanced DNA repair through droplet formation and p53 oscillations
MS Heltberg, A Lucchetti, FS Hsieh, DPM Nguyen… - Cell, 2022 - cell.com
Living organisms are constantly exposed to DNA damage, and optimal repair is therefore
crucial. A characteristic hallmark of the response is the formation of sub-compartments …
crucial. A characteristic hallmark of the response is the formation of sub-compartments …
[PDF][PDF] Sustained oscillations and time delays in gene expression of protein Hes1
A number of genes change their expression pattern dynamically by displaying oscillations.
In a few important cases these oscillations are sustained and can work as molecular clocks …
In a few important cases these oscillations are sustained and can work as molecular clocks …
Minimal model of spiky oscillations in NF-κB signaling
The NF-κB signaling system is involved in a variety of cellular processes including immune
response, inflammation, and apoptosis. Recent experiments have found oscillations in the …
response, inflammation, and apoptosis. Recent experiments have found oscillations in the …
From structure to dynamics: frequency tuning in the p53–mdm2 network: I. logical approach
We investigate the dynamical properties of a simple four-variable model describing the
interactions between the tumour suppressor protein p53, its main negative regulator Mdm2 …
interactions between the tumour suppressor protein p53, its main negative regulator Mdm2 …
Oscillations and temporal signalling in cells
The development of new techniques to quantitatively measure gene expression in cells has
shed light on a number of systems that display oscillations in protein concentration. Here we …
shed light on a number of systems that display oscillations in protein concentration. Here we …