Sequence capture versus restriction site associated DNA sequencing for shallow systematics
Sequence capture and restriction site associated DNA sequencing (RAD-Seq) are two
genomic enrichment strategies for applying next-generation sequencing technologies to …
genomic enrichment strategies for applying next-generation sequencing technologies to …
Species concepts of Dothideomycetes: classification, phylogenetic inconsistencies and taxonomic standardization
D Pem, R Jeewon, KWT Chethana, S Hongsanan… - Fungal Diversity, 2021 - Springer
The species is one of the basic units of biological classification. Both species concepts and
recognition are essential topics in taxonomic studies and other biological research. In the …
recognition are essential topics in taxonomic studies and other biological research. In the …
Linked selection and recombination rate variation drive the evolution of the genomic landscape of differentiation across the speciation continuum of Ficedula …
Speciation is a continuous process during which genetic changes gradually accumulate in
the genomes of diverging species. Recent studies have documented highly heterogeneous …
the genomes of diverging species. Recent studies have documented highly heterogeneous …
PSMC analysis of effective population sizes in molecular ecology and its application to black‐and‐white Ficedula flycatchers
Climatic fluctuations during the Quaternary period governed the demography of species and
contributed to population differentiation and ultimately speciation. Studies of these past …
contributed to population differentiation and ultimately speciation. Studies of these past …
Irrational exuberance for resolved species trees
Phylogenomics has largely succeeded in its aim of accurately inferring species trees, even
when there are high levels of discordance among individual gene trees. These resolved …
when there are high levels of discordance among individual gene trees. These resolved …
Recombination-aware phylogenomics reveals the structured genomic landscape of hybridizing cat species
G Li, HV Figueiró, E Eizirik… - Molecular biology and …, 2019 - academic.oup.com
Current phylogenomic approaches implicitly assume that the predominant phylogenetic
signal within a genome reflects the true evolutionary history of organisms, without assessing …
signal within a genome reflects the true evolutionary history of organisms, without assessing …
Reticulation, divergence, and the phylogeography–phylogenetics continuum
Phylogeography, and its extensions into comparative phylogeography, have their roots in
the layering of gene trees across geography, a paradigm that was greatly facilitated by the …
the layering of gene trees across geography, a paradigm that was greatly facilitated by the …
Phylogenetic trees and networks can serve as powerful and complementary approaches for analysis of genomic data
Genomic data have had a profound impact on nearly every biological discipline. In
systematics and phylogenetics, the thousands of loci that are now being sequenced can be …
systematics and phylogenetics, the thousands of loci that are now being sequenced can be …
The phylogenomic forest of bird trees contains a hard polytomy at the root of Neoaves
A Suh - Zoologica Scripta, 2016 - Wiley Online Library
Birds have arguably been the most intensely studied animal group for their phylogenetic
relationships. However, the recent advent of genome‐scale phylogenomics has made the …
relationships. However, the recent advent of genome‐scale phylogenomics has made the …
[HTML][HTML] Genome-wide evolutionary analysis of natural history and adaptation in the world's tigers
No other species attracts more international resources, public attention, and protracted
controversies over its intraspecific taxonomy than the tiger (Panthera tigris)[1, 2]. Today …
controversies over its intraspecific taxonomy than the tiger (Panthera tigris)[1, 2]. Today …